ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107906080	protein phosphatase 2C 16
ghi-r.1	107907032	protein phosphatase 2C 53
ghi-r.1	107932251	protein phosphatase 2C 77
ghi-r.1	107932876	protein phosphatase 2C 77
ath-u.5	ABI1	Protein phosphatase 2C family protein
ath-u.5	ABI2	Protein phosphatase 2C family protein
bra-r.6	103872541	protein phosphatase 2C 7
bra-r.6	103863846	protein phosphatase 2C 56
bra-r.6	103861611	protein phosphatase 2C 56
bna-r.1	106418606	protein phosphatase 2C 77
bna-r.1	106429516	protein phosphatase 2C 56-like
bna-r.1	106346859	protein phosphatase 2C 7
cit-r.1	102624980	protein phosphatase 2C 77
cit-r.1	102616426	protein phosphatase 2C 16
cit-r.1	102628329	protein phosphatase 2C 53-like
gma-u.5	102662702	protein phosphatase 2C 77
gma-u.5	100812974	protein phosphatase 2C 50
gma-u.5	100805281	protein phosphatase 2C 77
vvi-u.5	100267957	protein phosphatase 2C 77
vvi-u.5	100242262	protein phosphatase 2C 53
vvi-u.5	100241147	protein phosphatase 2C 16
ppo-u.5	7478176	protein phosphatase 2C 16
ppo-u.5	7470679	protein phosphatase 2C 53
mtr-u.5	11425747	protein phosphatase 2C 53
mtr-u.5	11431922	protein phosphatase 2C 50
mtr-u.5	25486432	protein phosphatase 2C 56
sly-u.5	PP2C-1	protein phosphatase 2C ABI2 homolog
sly-u.5	101250718	probable protein phosphatase 2C 6
sly-u.5	101265524	protein phosphatase 2C 53
sot-r.1	102582883	probable protein phosphatase 2C 6
sot-r.1	102593313	probable protein phosphatase 2C 53
sot-r.1	102591856	probable protein phosphatase 2C 50
nta-r.1	107820023	protein phosphatase 2C 50-like
nta-r.1	107763344	protein phosphatase 2C 50
nta-r.1	107772321	protein phosphatase 2C 16
osa-u.5	4324201	probable protein phosphatase 2C 6
osa-u.5	4339454	protein phosphatase 2C 50
osa-u.5	PP2C53	protein phosphatase 2C 53-like
zma-u.5	100283932	protein phosphatase 2C ABI2
zma-u.5	109941434	probable protein phosphatase 2C 6
zma-u.5	100381549	uncharacterized LOC100381549
tae-r.2	123182802	protein phosphatase 2C 50
tae-r.2	123070003	probable protein phosphatase 2C 6
hvu-r.1	123443761	probable protein phosphatase 2C 6
hvu-r.1	123444260	protein phosphatase 2C 50-like
hvu-r.1	123448346	protein phosphatase 2C 50-like
sbi-r.1	8078643	probable protein phosphatase 2C 6
sbi-r.1	8061070	probable protein phosphatase 2C 50
bdi-r.1	100830931	probable protein phosphatase 2C 50
bdi-r.1	100846802	probable protein phosphatase 2C 53
bdi-r.1	100823766	probable protein phosphatase 2C 6
cre-r.1	CHLRE_02g141250v5	uncharacterized protein

Top 50 coexpressed genes to 107906080 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107906080 (ghi-r.1 coexpression data)

CoexMap"107906080"

[Cytoscape]

Annotation

functional annotation

KEGG

ghi04016 [list] [network] MAPK signaling pathway - plant (428 genes)

ghi04075 [list] [network] Plant hormone signal transduction (1215 genes)

GO BP

GO:0035970 [list] [network] peptidyl-threonine dephosphorylation

(172 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(7681 genes)

IEA

GO MF

GO:0004722 [list] [network] protein serine/threonine phosphatase activity	(301 genes)	IEA
GO:0043169 [list] [network] cation binding	(4837 genes)	IEA

Protein

XP_016688431.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 2, plas 2, E.R. 2, E.R._plas 2, nucl 1, cyto 1, cyto_nucl 1

(predict for XP_016688431.2)

Subcellular
localization
TargetP

other 7

(predict for XP_016688431.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107906080	ghi-r.1 for 107907032	ghi-r.1 for 107932251	ghi-r.1 for 107932876	ath-u.5 for ABI1	ath-u.5 for ABI2	bra-r.6 for 103872541	bra-r.6 for 103863846	bra-r.6 for 103861611	bna-r.1 for 106418606	bna-r.1 for 106429516	bna-r.1 for 106346859	cit-r.1 for 102624980	cit-r.1 for 102616426	cit-r.1 for 102628329	gma-u.5 for 102662702	gma-u.5 for 100812974	gma-u.5 for 100805281	vvi-u.5 for 100267957	vvi-u.5 for 100242262	vvi-u.5 for 100241147	ppo-u.5 for 7478176	ppo-u.5 for 7470679	mtr-u.5 for 11425747	mtr-u.5 for 11431922	mtr-u.5 for 25486432	sly-u.5 for PP2C-1	sly-u.5 for 101250718	sly-u.5 for 101265524	sot-r.1 for 102582883	sot-r.1 for 102593313	sot-r.1 for 102591856	nta-r.1 for 107820023	nta-r.1 for 107763344	nta-r.1 for 107772321	osa-u.5 for 4324201	osa-u.5 for 4339454	osa-u.5 for PP2C53	zma-u.5 for 100283932	zma-u.5 for 109941434	zma-u.5 for 100381549	tae-r.2 for 123182802	tae-r.2 for 123070003	hvu-r.1 for 123443761	hvu-r.1 for 123444260	hvu-r.1 for 123448346	sbi-r.1 for 8078643	sbi-r.1 for 8061070	bdi-r.1 for 100830931	bdi-r.1 for 100846802	bdi-r.1 for 100823766	cre-r.1 for CHLRE_02g141250v5

Ortholog

Ortholog ID: 834

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

LOC107906080

LOC107932251

LOC107958856

ABI1

HAB1

ABI2

PP2C53

Function^*

protein phosphatase 2C 16

protein phosphatase 2C 77

protein phosphatase 2C 53

Protein phosphatase 2C family protein

HYPERSENSITIVE TO ABA1

protein phosphatase 2C 7

protein phosphatase 2C 56

protein phosphatase 2C 77

protein phosphatase 2C 56-like

protein phosphatase 2C 16-like

protein phosphatase 2C 7

protein phosphatase 2C 77

protein phosphatase 2C 16

protein phosphatase 2C 53-like

protein phosphatase 2C 77

protein phosphatase 2C 56

protein phosphatase 2C 77

protein phosphatase 2C 53

protein phosphatase 2C 16

protein phosphatase 2C 53

protein phosphatase 2C 50

protein phosphatase 2C 53

protein phosphatase 2C 56

protein phosphatase 2C 77