ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107906678	uncharacterized LOC107906678
ghi-r.1	121223546	uncharacterized LOC121223546
ghi-r.1	107959216	uncharacterized LOC107959216
ghi-r.1	107935732	uncharacterized LOC107935732
ath-u.5	AT3G44280	peptidyl-prolyl cis-trans isomerase G
ath-u.5	AT5G22280	peptidyl-prolyl cis-trans isomerase G
bra-r.6	103848070	uncharacterized LOC103848070
bra-r.6	103851431	uncharacterized LOC103851431
bra-r.6	103856508	uncharacterized LOC103856508
bna-r.1	106384732	uncharacterized LOC106384732
bna-r.1	106427314	uncharacterized LOC106427314
cit-r.1	102628442	hypothetical protein
gma-u.5	100500255	uncharacterized LOC100500255
vvi-u.5	100243239	uncharacterized LOC100243239
ppo-u.5	7474456	uncharacterized LOC7474456
ppo-u.5	18098095	uncharacterized LOC18098095
ppo-u.5	18106187	uncharacterized LOC18106187
mtr-u.5	25492244	uncharacterized LOC25492244
mtr-u.5	112419516	uncharacterized LOC112419516
sly-u.5	112940066	uncharacterized LOC112940066
sot-r.1	107057997	uncharacterized LOC107057997
nta-r.1	107804378	uncharacterized LOC107804378
osa-u.5	4329570	uncharacterized LOC4329570
osa-u.5	4334705	uncharacterized LOC4334705
osa-u.5	4342842	uncharacterized LOC4342842
zma-u.5	100274930	uncharacterized LOC100274930
zma-u.5	100192095	uncharacterized LOC100192095
zma-u.5	100276186	uncharacterized LOC100276186
tae-r.2	123044915	uncharacterized LOC123044915
tae-r.2	123087758	uncharacterized LOC123087758
tae-r.2	123114180	uncharacterized LOC123114180
hvu-r.1	123394948	uncharacterized LOC123394948
sbi-r.1	8064226	uncharacterized LOC8064226
sbi-r.1	8080189	uncharacterized LOC8080189
bdi-r.1	100841103	uncharacterized LOC100841103
bdi-r.1	100839851	uncharacterized LOC100839851

Top 50 coexpressed genes to 107906678 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107906678 (ghi-r.1 coexpression data)

CoexMap"107906678"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_040949337.1 [sequence] [blastp]

Subcellular
localization
wolf

vacu 4, extr 2, E.R. 2, golg 1

(predict for XP_040949337.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_040949337.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107906678	ghi-r.1 for 121223546	ghi-r.1 for 107959216	ghi-r.1 for 107935732	ath-u.5 for AT3G44280	ath-u.5 for AT5G22280	bra-r.6 for 103848070	bra-r.6 for 103851431	bra-r.6 for 103856508	bna-r.1 for 106384732	bna-r.1 for 106427314	cit-r.1 for 102628442	gma-u.5 for 100500255	vvi-u.5 for 100243239	ppo-u.5 for 7474456	ppo-u.5 for 18098095	ppo-u.5 for 18106187	mtr-u.5 for 25492244	mtr-u.5 for 112419516	sly-u.5 for 112940066	sot-r.1 for 107057997	nta-r.1 for 107804378	osa-u.5 for 4329570	osa-u.5 for 4334705	osa-u.5 for 4342842	zma-u.5 for 100274930	zma-u.5 for 100192095	zma-u.5 for 100276186	tae-r.2 for 123044915	tae-r.2 for 123087758	tae-r.2 for 123114180	hvu-r.1 for 123394948	sbi-r.1 for 8064226	sbi-r.1 for 8080189	bdi-r.1 for 100841103	bdi-r.1 for 100839851

Ortholog

Ortholog ID: 4569

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107906678

uncharacterized LOC121223546

uncharacterized LOC107891538

peptidyl-prolyl cis-trans isomerase G

uncharacterized LOC103848070

uncharacterized LOC103851431

uncharacterized LOC103856508

uncharacterized LOC106384732

uncharacterized LOC106386949

uncharacterized LOC106386946

hypothetical protein

uncharacterized LOC100500255

uncharacterized LOC100243239

uncharacterized LOC7474456

uncharacterized LOC18098095

uncharacterized LOC18106187

uncharacterized LOC25492244

uncharacterized LOC112419516

uncharacterized LOC112940066

uncharacterized LOC107057997

uncharacterized LOC107804378

uncharacterized LOC4329570

uncharacterized LOC4334705

uncharacterized LOC4342842

uncharacterized LOC100274930

uncharacterized LOC100192095

uncharacterized LOC100276186

uncharacterized LOC123044915

uncharacterized LOC123087758

uncharacterized LOC123114180

uncharacterized LOC123394948

uncharacterized LOC8064226

uncharacterized LOC8080189

uncharacterized LOC100841103

uncharacterized LOC100839851

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00620	Pyruvate metabolism	2
ghi00230	Purine metabolism	2
ghi00730	Thiamine metabolism	2
ghi01232	Nucleotide metabolism	2
ghi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	4
ghi04145	Phagosome	4
ghi03083	Polycomb repressive complex	2
ghi04120	Ubiquitin mediated proteolysis	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03460	Fanconi anemia pathway	2
ghi00562	Inositol phosphate metabolism	2
ghi00564	Glycerophospholipid metabolism	2
ghi04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	4
ath04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4
ath03020	RNA polymerase	3
ath03420	Nucleotide excision repair	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03015	mRNA surveillance pathway	2
bna03018	RNA degradation	2
bna04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	5
bna03013	Nucleocytoplasmic transport	3
bna03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03050	Proteasome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	4
ppo04120	Ubiquitin mediated proteolysis	2
ppo04144	Endocytosis	2
ppo04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	2
mtr04070	Phosphatidylinositol signaling system	2
mtr04075	Plant hormone signal transduction	2
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	6
sot03250	Viral life cycle - HIV-1	2
sot03272	Virion - Hepatitis viruses	2
sot00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	5
nta04136	Autophagy - other	5
nta04382	Cornified envelope formation	5
nta04141	Protein processing in endoplasmic reticulum	3
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	2
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	3
osa03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04626	Plant-pathogen interaction	3
zma04144	Endocytosis	3
zma00051	Fructose and mannose metabolism	2
zma00500	Starch and sucrose metabolism	2
zma00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	4
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00051	Fructose and mannose metabolism	3
tae00520	Amino sugar and nucleotide sugar metabolism	3
tae00541	Biosynthesis of various nucleotide sugars	3
tae01240	Biosynthesis of cofactors	3
tae01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	3
sbi04120	Ubiquitin mediated proteolysis	3
sbi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	2
sbi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	3
bdi03250	Viral life cycle - HIV-1	2
bdi03272	Virion - Hepatitis viruses	2
bdi04144	Endocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

107906678

121223546

107891538

823553

832288

103848070

103851431

103856508

106384732

106386949

106386946

102628442

100500255

100243239

7474456

18098095

18106187

25492244

112419516

112940066

107057997

107804378

4329570

4334705

4342842

100274930

100192095

100276186

123044915

123087758

123114180

123394948

8064226

8080189

100841103

100839851

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	3	2	1	1	1	3	2	1	1	1	3	3	3	1	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107906678 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107906678 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**