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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107906851   aspartate aminotransferase, chloroplastic 
 ath-u.5   ASP5   aspartate aminotransferase 5 
 gma-u.5   547792   aspartate aminotransferase 
 gma-u.5   100811514   aspartate aminotransferase P2, mitochondrial 
 vvi-u.5   100242364   aspartate aminotransferase, chloroplastic 
 ppo-u.5   7489135   aspartate aminotransferase, chloroplastic 
 ppo-u.5   7465406   aspartate aminotransferase, chloroplastic 
 mtr-u.5   25481947   aspartate aminotransferase P2, mitochondrial 
 sly-u.5   101261642   aspartate aminotransferase, chloroplastic 
 osa-u.5   4331017   aspartate aminotransferase, chloroplastic 
 zma-u.5   100282625   aspartate aminotransferase 

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Top 50 coexpressed genes to 107906851 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107906851 (ghi-r.1 coexpression data)

CoexMap"107906851"


ghiLOC107906851 | Entrez gene ID : 107906851    
Species ghi ath gma vvi ppo mtr sly osa zma hvu bna cit bra sbi bdi nta tae cre sot
Paralog 1 1 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00220 [list] [network] Arginine biosynthesis (92 genes)
ghi00250 [list] [network] Alanine, aspartate and glutamate metabolism (131 genes)
ghi00270 [list] [network] Cysteine and methionine metabolism (291 genes)
ghi00330 [list] [network] Arginine and proline metabolism (150 genes)
ghi00350 [list] [network] Tyrosine metabolism (108 genes)
ghi00360 [list] [network] Phenylalanine metabolism (75 genes)
ghi00400 [list] [network] Phenylalanine, tyrosine and tryptophan biosynthesis (103 genes)
ghi00950 [list] [network] Isoquinoline alkaloid biosynthesis (56 genes)
ghi00960 [list] [network] Tropane, piperidine and pyridine alkaloid biosynthesis (59 genes)
ghi01210 [list] [network] 2-Oxocarboxylic acid metabolism (211 genes)
ghi01230 [list] [network] Biosynthesis of amino acids (568 genes)
GO BP
GO:0006520 [list] [network] amino acid metabolic process  (883 genes)  IEA  
GO:0009058 [list] [network] biosynthetic process  (7227 genes)  IEA  
GO CC
GO MF
GO:0008483 [list] [network] transaminase activity  (139 genes)  IEA  
GO:0030170 [list] [network] pyridoxal phosphate binding  (218 genes)  IEA  
Protein XP_016689469.2 [sequence] [blastp]
XP_016689470.2 [sequence] [blastp]
XP_040949166.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  cyto_plas 3  (predict for XP_016689469.2)
cyto 4,  chlo 4,  cysk 1  (predict for XP_016689470.2)
cysk 10  (predict for XP_040949166.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016689469.2)
chlo 9  (predict for XP_016689470.2)
other 9  (predict for XP_040949166.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107906851
ath-u.5
for
ASP5
gma-u.5
for
547792
gma-u.5
for
100811514
vvi-u.5
for
100242364
ppo-u.5
for
7489135
ppo-u.5
for
7465406
mtr-u.5
for
25481947
sly-u.5
for
101261642
osa-u.5
for
4331017
zma-u.5
for
100282625


Ortholog ID: 7687
Species ghi ghi ath bra bra bna bna cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC107906851 LOC107962919 ASP5 LOC103862102 LOC103851376 LOC125609243 LOC106371888 LOC102617301 LOC547792 LOC100811514 LOC100242364 LOC7489135 LOC7465406 LOC25481947 LOC101261642 LOC102605614 LOC107763872 LOC107820992 LOC4331017 LOC100282625 LOC100192196 LOC123145931 LOC123402558 LOC110434826 LOC100831644 CHLRE_02g097900v5
Function* aspartate aminotransferase, chloroplastic aspartate aminotransferase, chloroplastic aspartate aminotransferase 5 aspartate aminotransferase, chloroplastic aspartate aminotransferase, chloroplastic aspartate aminotransferase, chloroplastic aspartate aminotransferase, chloroplastic aspartate aminotransferase, chloroplastic aspartate aminotransferase aspartate aminotransferase P2, mitochondrial aspartate aminotransferase, chloroplastic aspartate aminotransferase, chloroplastic aspartate aminotransferase, chloroplastic aspartate aminotransferase P2, mitochondrial aspartate aminotransferase, chloroplastic aspartate aminotransferase, chloroplastic-like aspartate aminotransferase, chloroplastic aspartate aminotransferase, chloroplastic-like aspartate aminotransferase, chloroplastic aspartate aminotransferase aspartate aminotransferase P2, mitochondrial aspartate aminotransferase, chloroplastic aspartate aminotransferase, chloroplastic aspartate aminotransferase, chloroplastic aspartate aminotransferase P2, mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00051 Fructose and mannose metabolism 6
ghi01230 Biosynthesis of amino acids 5
ghi03010 Ribosome 4
ghi00010 Glycolysis / Gluconeogenesis 4
ghi00220 Arginine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00220 Arginine biosynthesis 3
ghi00250 Alanine, aspartate and glutamate metabolism 3
ghi00270 Cysteine and methionine metabolism 3
ghi00330 Arginine and proline metabolism 3
ghi00350 Tyrosine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 8
ath00010 Glycolysis / Gluconeogenesis 6
ath01240 Biosynthesis of cofactors 6
ath00020 Citrate cycle (TCA cycle) 5
ath00620 Pyruvate metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 4
bra00270 Cysteine and methionine metabolism 2
bra00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 4
bra00061 Fatty acid biosynthesis 3
bra01212 Fatty acid metabolism 3
bra00620 Pyruvate metabolism 3
bra01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00220 Arginine biosynthesis 4
bna00250 Alanine, aspartate and glutamate metabolism 4
bna00270 Cysteine and methionine metabolism 4
bna00330 Arginine and proline metabolism 4
bna00350 Tyrosine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
bna00220 Arginine biosynthesis 4
bna00250 Alanine, aspartate and glutamate metabolism 4
bna00270 Cysteine and methionine metabolism 4
bna00330 Arginine and proline metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01210 2-Oxocarboxylic acid metabolism 2
cit03010 Ribosome 2
cit01230 Biosynthesis of amino acids 2
cit00053 Ascorbate and aldarate metabolism 2
cit00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 13
gma01230 Biosynthesis of amino acids 9
gma01200 Carbon metabolism 7
gma00620 Pyruvate metabolism 6
gma00350 Tyrosine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 7
gma00010 Glycolysis / Gluconeogenesis 6
gma01200 Carbon metabolism 5
gma00330 Arginine and proline metabolism 3
gma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01210 2-Oxocarboxylic acid metabolism 5
vvi01200 Carbon metabolism 4
vvi00620 Pyruvate metabolism 4
vvi01230 Biosynthesis of amino acids 3
vvi00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 6
ppo01200 Carbon metabolism 5
ppo00010 Glycolysis / Gluconeogenesis 4
ppo00710 Carbon fixation by Calvin cycle 3
ppo00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo00860 Porphyrin metabolism 2
ppo00220 Arginine biosynthesis 2
ppo00250 Alanine, aspartate and glutamate metabolism 2
ppo00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00250 Alanine, aspartate and glutamate metabolism 3
mtr01230 Biosynthesis of amino acids 3
mtr00500 Starch and sucrose metabolism 2
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 5
sly00270 Cysteine and methionine metabolism 3
sly01200 Carbon metabolism 3
sly01240 Biosynthesis of cofactors 3
sly01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 5
sot01230 Biosynthesis of amino acids 3
sot00620 Pyruvate metabolism 2
sot00270 Cysteine and methionine metabolism 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 4
nta00190 Oxidative phosphorylation 4
nta04145 Phagosome 4
nta00220 Arginine biosynthesis 2
nta00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 7
nta04145 Phagosome 7
nta04146 Peroxisome 3
nta00220 Arginine biosynthesis 2
nta00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01210 2-Oxocarboxylic acid metabolism 6
osa01230 Biosynthesis of amino acids 5
osa00620 Pyruvate metabolism 5
osa00785 Lipoic acid metabolism 5
osa01200 Carbon metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 5
zma00710 Carbon fixation by Calvin cycle 5
zma01200 Carbon metabolism 5
zma00010 Glycolysis / Gluconeogenesis 3
zma00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 9
tae00710 Carbon fixation by Calvin cycle 8
tae01230 Biosynthesis of amino acids 8
tae00270 Cysteine and methionine metabolism 7
tae00010 Glycolysis / Gluconeogenesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 9
tae00010 Glycolysis / Gluconeogenesis 8
tae01230 Biosynthesis of amino acids 8
tae00710 Carbon fixation by Calvin cycle 7
tae00051 Fructose and mannose metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00620 Pyruvate metabolism 3
sbi00710 Carbon fixation by Calvin cycle 3
sbi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 3
bdi00250 Alanine, aspartate and glutamate metabolism 2
bdi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 12
cre00220 Arginine biosynthesis 10
cre01210 2-Oxocarboxylic acid metabolism 7
cre00250 Alanine, aspartate and glutamate metabolism 6
cre01200 Carbon metabolism 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107906851 107962919 829330 103862102 103851376 125609243 106371888 102617301 547792 100811514 100242364 7489135 7465406 25481947 101261642 102605614 107763872 107820992 4331017 100282625 100192196 123145931 123402558 110434826 100831644 5725589
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