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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107907370   transcription factor bHLH35 
 ath-u.5   AT4G29930   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   AT5G57150   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   100817978   transcription factor bHLH35-like 
 gma-u.5   100817061   transcription factor bHLH35 
 gma-u.5   100803916   transcription factor bHLH35 
 vvi-u.5   100244514   transcription factor bHLH35 
 ppo-u.5   7485500   transcription factor bHLH35 
 ppo-u.5   7484064   transcription factor bHLH35 
 mtr-u.5   11441152   transcription factor bHLH35 
 sly-u.5   101260639   transcription factor bHLH35 
 sly-u.5   101266736   transcription factor bHLH35 
 osa-u.5   4335417   transcription factor BHLH6-like 
 zma-u.5   100281107   uncharacterized LOC100281107 
 zma-u.5   100284818   uncharacterized LOC100284818 

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Top 50 coexpressed genes to 107907370 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107907370 (ghi-r.1 coexpression data)

CoexMap"107907370"


ghiLOC107907370 | Entrez gene ID : 107907370    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 2 3 1 2 1 2 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (1206 genes)  IEA  
GO:0043565 [list] [network] sequence-specific DNA binding  (1947 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
Protein XP_016690212.1 [sequence] [blastp]
XP_016690213.1 [sequence] [blastp]
XP_016690214.1 [sequence] [blastp]
XP_016690215.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cysk 1,  plas 1,  pero 1  (predict for XP_016690212.1)
nucl 8,  cysk 1  (predict for XP_016690213.1)
nucl 9,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_016690214.1)
nucl 9,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_016690215.1)
Subcellular
localization
TargetP
other 7  (predict for XP_016690212.1)
other 7  (predict for XP_016690213.1)
chlo 2  (predict for XP_016690214.1)
other 3  (predict for XP_016690215.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107907370
ath-u.5
for
AT4G29930
ath-u.5
for
AT5G57150
gma-u.5
for
100817978
gma-u.5
for
100817061
gma-u.5
for
100803916
vvi-u.5
for
100244514
ppo-u.5
for
7485500
ppo-u.5
for
7484064
mtr-u.5
for
11441152
sly-u.5
for
101260639
sly-u.5
for
101266736
osa-u.5
for
4335417
zma-u.5
for
100281107
zma-u.5
for
100284818


Ortholog ID: 3127
Species ghi ghi ath ath bra bra bna bna cit gma gma vvi mtr sly sly sot sot nta nta osa zma zma tae hvu sbi sbi bdi
Symbol LOC107907370 LOC121225269 AT4G29930 AT5G57150 LOC103845153 LOC103853098 LOC106441017 LOC106417723 LOC102609092 LOC100817978 LOC100803916 LOC100244514 LOC11441152 LOC101266736 LOC101260639 LOC102606395 LOC102587344 LOC107774553 LOC107774314 LOC4335417 LOC100281107 LOC100284818 LOC123045198 LOC123430163 LOC8069641 LOC8081697 LOC100821159
Function* transcription factor bHLH35 transcription factor bHLH35 basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH35 transcription factor bHLH27 transcription factor bHLH27 transcription factor bHLH27 transcription factor bHLH35 transcription factor bHLH35-like transcription factor bHLH35 transcription factor bHLH35 transcription factor bHLH35 transcription factor bHLH35 transcription factor bHLH35 transcription factor bHLH35 transcription factor bHLH35-like transcription factor bHLH35 transcription factor bHLH35 transcription factor BHLH6-like uncharacterized LOC100281107 uncharacterized LOC100284818 transcription factor BHLH6 transcription factor BHLH6-like transcription factor bHLH35 transcription factor bHLH35 transcription factor bHLH35
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
ghi00592 alpha-Linolenic acid metabolism 2
ghi03250 Viral life cycle - HIV-1 2
ghi03272 Virion - Hepatitis viruses 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00380 Tryptophan metabolism 3
ath00966 Glucosinolate biosynthesis 3
ath01210 2-Oxocarboxylic acid metabolism 3
ath04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00380 Tryptophan metabolism 4
ath00966 Glucosinolate biosynthesis 4
ath01210 2-Oxocarboxylic acid metabolism 4
ath00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00591 Linoleic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 8
gma04016 MAPK signaling pathway - plant 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 8
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00592 alpha-Linolenic acid metabolism 4
sly04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
sot00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta00592 alpha-Linolenic acid metabolism 4
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 5
nta00592 alpha-Linolenic acid metabolism 4
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 7
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 6
hvu00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107907370 121225269 829116 835821 103845153 103853098 106441017 106417723 102609092 100817978 100803916 100244514 11441152 101266736 101260639 102606395 102587344 107774553 107774314 4335417 100281107 100284818 123045198 123430163 8069641 8081697 100821159
The preparation time of this page was 2.7 [sec].