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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107907930   pentatricopeptide repeat-containing protein At1g51965, mitochondrial 
 ath-u.5   ABO5   ABA Overly-Sensitive 5 
 gma-u.5   100795211   pentatricopeptide repeat-containing protein At1g51965, mitochondrial 
 vvi-u.5   104880226   pentatricopeptide repeat-containing protein At1g51965, mitochondrial 
 ppo-u.5   18104298   pentatricopeptide repeat-containing protein At1g51965, mitochondrial 
 mtr-u.5   11412445   pentatricopeptide repeat-containing protein At1g51965, mitochondrial 
 sly-u.5   101258245   pentatricopeptide repeat-containing protein At1g51965, mitochondrial 
 osa-u.5   4328786   pentatricopeptide repeat-containing protein At1g51965, mitochondrial 
 zma-u.5   103654790   pentatricopeptide repeat-containing protein At1g51965, mitochondrial 

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Top 50 coexpressed genes to 107907930 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107907930 (ghi-r.1 coexpression data)

CoexMap"107907930"


ghiLOC107907930 | Entrez gene ID : 107907930    
Species ghi ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (890 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016690718.2 [sequence] [blastp]
XP_040945296.1 [sequence] [blastp]
XP_040945297.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 3,  cyto_mito 2  (predict for XP_016690718.2)
nucl 6,  mito 3,  cyto_mito 2  (predict for XP_040945296.1)
nucl 6,  mito 3,  cyto_mito 2  (predict for XP_040945297.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_016690718.2)
mito 7  (predict for XP_040945296.1)
mito 7  (predict for XP_040945297.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107907930

.
ath-u.5
for
ABO5

.
gma-u.5
for
100795211

.
vvi-u.5
for
104880226

.
ppo-u.5
for
18104298

.
mtr-u.5
for
11412445

.
sly-u.5
for
101258245

.
osa-u.5
for
4328786

.
zma-u.5
for
103654790

.


Ortholog ID: 11788
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi bna bna sbi sot cit bdi nta nta
Symbol ABO5 LOC100795211 LOC101258245 LOC4328786 LOC103654790 LOC103868528 LOC104880226 LOC18104298 LOC11412445 LOC123144479 LOC123127409 LOC123403609 LOC107907930 LOC125609487 LOC106425167 LOC8073794 LOC102603464 LOC102615541 LOC100824704 LOC107830620 LOC107793633
Function* ABA Overly-Sensitive 5 pentatricopeptide repeat-containing protein At1g51965, mitochondrial pentatricopeptide repeat-containing protein At1g51965, mitochondrial pentatricopeptide repeat-containing protein At1g51965, mitochondrial pentatricopeptide repeat-containing protein At1g51965, mitochondrial pentatricopeptide repeat-containing protein At1g51965, mitochondrial pentatricopeptide repeat-containing protein At1g51965, mitochondrial pentatricopeptide repeat-containing protein At1g51965, mitochondrial pentatricopeptide repeat-containing protein At1g51965, mitochondrial pentatricopeptide repeat-containing protein At1g51965, mitochondrial pentatricopeptide repeat-containing protein At1g51965, mitochondrial pentatricopeptide repeat-containing protein At1g51965, mitochondrial pentatricopeptide repeat-containing protein At1g51965, mitochondrial pentatricopeptide repeat-containing protein At1g51965, mitochondrial-like pentatricopeptide repeat-containing protein At1g51965, mitochondrial-like pentatricopeptide repeat-containing protein At1g51965, mitochondrial pentatricopeptide repeat-containing protein At1g51965, mitochondrial pentatricopeptide repeat-containing protein At1g51965, mitochondrial pentatricopeptide repeat-containing protein At1g51965, mitochondrial pentatricopeptide repeat-containing protein At1g51965, mitochondrial-like pentatricopeptide repeat-containing protein At1g51965, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03015 mRNA surveillance pathway 2
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae03020 RNA polymerase 3
tae00740 Riboflavin metabolism 3
tae00790 Folate biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841625 100795211 101258245 4328786 103654790 103868528 104880226 18104298 11412445 123144479 123127409 123403609 107907930 125609487 106425167 8073794 102603464 102615541 100824704 107830620 107793633
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