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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107909168   cytochrome c oxidase subunit 6b-2 
 ath-u.5   AT4G28060   Cytochrome c oxidase, subunit Vib family protein 
 ath-u.5   AT5G57815   Cytochrome c oxidase, subunit Vib family protein 
 ath-u.5   COX6B   cytochrome C oxidase 6B 
 gma-u.5   102665439   cytochrome c oxidase subunit 6b-2 
 gma-u.5   100820564   cytochrome c oxidase subunit 6b-2 
 gma-u.5   100818321   cytochrome c oxidase subunit 6b-2 
 vvi-u.5   100265595   cytochrome c oxidase subunit 6b-2 
 ppo-u.5   7486579   cytochrome c oxidase subunit 6b-1 
 ppo-u.5   7493359   cytochrome c oxidase subunit 6b-2 
 ppo-u.5   18096236   cytochrome c oxidase subunit 6b-1 
 mtr-u.5   11426814   cytochrome c oxidase subunit 6b-1 
 mtr-u.5   25494268   cytochrome c oxidase subunit 6b-2 
 sly-u.5   101246900   cytochrome c oxidase subunit 6b-1 
 sly-u.5   101258567   cytochrome c oxidase subunit 6b-2 
 osa-u.5   4343941   cytochrome c oxidase subunit 6b-1 
 osa-u.5   4336292   cytochrome c oxidase subunit 6b-2 
 osa-u.5   4333018   cytochrome c oxidase subunit 6b-1 
 zma-u.5   100192808   uncharacterized LOC100192808 
 zma-u.5   100272443   Cytochrome c oxidase subunit 6b-1 
 zma-u.5   100272303   cytochrome c oxidase subunit 6b-3 

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Top 50 coexpressed genes to 107909168 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107909168 (ghi-r.1 coexpression data)

CoexMap"107909168"


ghiLOC107909168 | Entrez gene ID : 107909168    
Species ghi ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna
Paralog 1 3 3 1 3 2 2 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00190 [list] [network] Oxidative phosphorylation (393 genes)
GO BP
GO CC
GO:0045277 [list] [network] respiratory chain complex IV  (12 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (1525 genes)  IEA  
GO MF
Protein XP_016692109.2 [sequence] [blastp]
XP_016692117.2 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 2,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_016692109.2)
mito 7,  chlo 1,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_016692117.2)
Subcellular
localization
TargetP
other 6  (predict for XP_016692109.2)
other 7  (predict for XP_016692117.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107909168

.
ath-u.5
for
AT4G28060

.
ath-u.5
for
AT5G57815

.
ath-u.5
for
COX6B

.
gma-u.5
for
102665439

.
gma-u.5
for
100820564

.
gma-u.5
for
100818321

.
vvi-u.5
for
100265595

.
ppo-u.5
for
7486579

.
ppo-u.5
for
7493359

.
ppo-u.5
for
18096236

.
mtr-u.5
for
11426814

.
mtr-u.5
for
25494268

.
sly-u.5
for
101246900

.
sly-u.5
for
101258567

.
osa-u.5
for
4343941

.
osa-u.5
for
4336292

.
osa-u.5
for
4333018

.
zma-u.5
for
100192808

.
zma-u.5
for
100272443

.
zma-u.5
for
100272303

.


Ortholog ID: 1131
Species ath ath gma gma sly osa osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi bna bna cre sbi sbi sot cit cit bdi bdi nta nta
Symbol AT5G57815 COX6B LOC100794661 LOC100820564 LOC101258567 LOC4343941 LOC4336292 LOC100192808 LOC100272443 LOC103861803 LOC103835699 LOC100263948 LOC18096236 LOC7486579 LOC25494268 LOC123052046 LOC123045912 LOC123427129 LOC107957782 LOC106440976 LOC106425889 CHLRE_06g304350v5 LOC8072449 LOC8061554 LOC102589509 LOC102607433 LOC102620251 LOC100822057 LOC100821563 LOC107795202 LOC107795736
Function* Cytochrome c oxidase, subunit Vib family protein cytochrome C oxidase 6B cytochrome c oxidase subunit 6b-1 cytochrome c oxidase subunit 6b-2 cytochrome c oxidase subunit 6b-2 cytochrome c oxidase subunit 6b-1 cytochrome c oxidase subunit 6b-2 uncharacterized LOC100192808 Cytochrome c oxidase subunit 6b-1 cytochrome c oxidase subunit 6b-3 cytochrome c oxidase subunit 6b-3 cytochrome c oxidase subunit 6b-1 cytochrome c oxidase subunit 6b-1 cytochrome c oxidase subunit 6b-1 cytochrome c oxidase subunit 6b-2 cytochrome c oxidase subunit 6b-1 cytochrome c oxidase subunit 6b-3 cytochrome c oxidase subunit 6b-3 cytochrome c oxidase subunit 6b-1 cytochrome c oxidase subunit 6b-3 cytochrome c oxidase subunit 6b-3 uncharacterized protein cytochrome c oxidase subunit 6b-2 cytochrome c oxidase subunit 6b-1 cytochrome c oxidase subunit 6b-2 cytochrome c oxidase subunit 6b-2 cytochrome c oxidase subunit 6b-1 cytochrome c oxidase subunit 6b-1 cytochrome c oxidase subunit 6b-2 uncharacterized LOC107795202 uncharacterized LOC107795736
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 11
ath00230 Purine metabolism 2
ath01232 Nucleotide metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 9
gma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00280 Valine, leucine and isoleucine degradation 7
osa00310 Lysine degradation 3
osa00071 Fatty acid degradation 2
osa00330 Arginine and proline metabolism 2
osa00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 7
osa04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 11
zma00020 Citrate cycle (TCA cycle) 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 8
zma00020 Citrate cycle (TCA cycle) 5
zma01200 Carbon metabolism 5
zma01210 2-Oxocarboxylic acid metabolism 4
zma00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
bra03018 RNA degradation 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 2
bra00051 Fructose and mannose metabolism 2
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00020 Citrate cycle (TCA cycle) 3
vvi01200 Carbon metabolism 3
vvi00010 Glycolysis / Gluconeogenesis 2
vvi00620 Pyruvate metabolism 2
vvi00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 8
ppo04141 Protein processing in endoplasmic reticulum 7
ppo00510 N-Glycan biosynthesis 2
ppo00513 Various types of N-glycan biosynthesis 2
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 5
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 6
tae03013 Nucleocytoplasmic transport 2
tae04144 Endocytosis 2
tae04145 Phagosome 2
tae04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 8
ghi04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 4
bna01232 Nucleotide metabolism 4
bna00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 4
sbi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 9
sot04145 Phagosome 6
sot04142 Lysosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 3
cit03050 Proteasome 2
cit04136 Autophagy - other 2
cit00510 N-Glycan biosynthesis 2
cit00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 9
bdi01200 Carbon metabolism 3
bdi00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 12
nta01210 2-Oxocarboxylic acid metabolism 10
nta00020 Citrate cycle (TCA cycle) 6
nta00785 Lipoic acid metabolism 6
nta00710 Carbon fixation by Calvin cycle 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 10
nta03082 ATP-dependent chromatin remodeling 3
nta02010 ABC transporters 2
nta00020 Citrate cycle (TCA cycle) 2
nta01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835891 838851 100794661 100820564 101258567 4343941 4336292 100192808 100272443 103861803 103835699 100263948 18096236 7486579 25494268 123052046 123045912 123427129 107957782 106440976 106425889 5716913 8072449 8061554 102589509 102607433 102620251 100822057 100821563 107795202 107795736
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