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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107910088   U-box domain-containing protein 4 
 ghi-r.1   107962070   U-box domain-containing protein 4 
 ghi-r.1   107907405   U-box domain-containing protein 4 
 ghi-r.1   107905687   U-box domain-containing protein 4 
 ath-u.5   AT4G16490   ARM repeat superfamily protein 
 bra-r.6   103869500   U-box domain-containing protein 4 
 bra-r.6   103860854   U-box domain-containing protein 4 
 bna-r.1   106446324   U-box domain-containing protein 4 
 bna-r.1   106391991   U-box domain-containing protein 4-like 
 bna-r.1   106410891   U-box domain-containing protein 4-like 
 cit-r.1   102623778   U-box domain-containing protein 4 
 gma-u.5   102670410   protein spotted leaf 11 
 gma-u.5   100818658   U-box domain-containing protein 4 
 gma-u.5   100806768   U-box domain-containing protein 4 
 vvi-u.5   100854922   U-box domain-containing protein 4 
 ppo-u.5   7455820   U-box domain-containing protein 4 
 ppo-u.5   7463687   U-box domain-containing protein 4 
 mtr-u.5   11407167   U-box domain-containing protein 4 
 sly-u.5   101260811   U-box domain-containing protein 4-like 
 sly-u.5   101259015   U-box domain-containing protein 4 
 sot-r.1   102602037   U-box domain-containing protein 4-like 
 sot-r.1   102593590   U-box domain-containing protein 4 
 nta-r.1   107801845   uncharacterized LOC107801845 
 nta-r.1   107795669   uncharacterized LOC107795669 
 nta-r.1   107777425   uncharacterized LOC107777425 
 osa-u.5   4343741   U-box domain-containing protein 4 
 zma-u.5   100284324   uncharacterized LOC100284324 
 zma-u.5   103647786   U-box domain-containing protein 4 
 tae-r.2   123188136   U-box domain-containing protein 4 
 tae-r.2   123052267   U-box domain-containing protein 4 
 tae-r.2   123044402   U-box domain-containing protein 4 
 hvu-r.1   123425531   U-box domain-containing protein 4-like 
 sbi-r.1   8078965   U-box domain-containing protein 4 
 bdi-r.1   100835388   U-box domain-containing protein 4 

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Top 50 coexpressed genes to 107910088 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107910088 (ghi-r.1 coexpression data)

CoexMap"107910088"


ghiLOC107910088 | Entrez gene ID : 107910088    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 2 3 1 3 1 2 1 2 2 3 1 2 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016693329.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  nucl 1,  plas 1,  pero 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1  (predict for XP_016693329.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016693329.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107910088
ghi-r.1
for
107962070
ghi-r.1
for
107907405
ghi-r.1
for
107905687
ath-u.5
for
AT4G16490
bra-r.6
for
103869500
bra-r.6
for
103860854
bna-r.1
for
106446324
bna-r.1
for
106391991
bna-r.1
for
106410891
cit-r.1
for
102623778
gma-u.5
for
102670410
gma-u.5
for
100818658
gma-u.5
for
100806768
vvi-u.5
for
100854922
ppo-u.5
for
7455820
ppo-u.5
for
7463687
mtr-u.5
for
11407167
sly-u.5
for
101260811
sly-u.5
for
101259015
sot-r.1
for
102602037
sot-r.1
for
102593590
nta-r.1
for
107801845
nta-r.1
for
107795669
nta-r.1
for
107777425
osa-u.5
for
4343741
zma-u.5
for
100284324
zma-u.5
for
103647786
tae-r.2
for
123188136
tae-r.2
for
123052267
tae-r.2
for
123044402
hvu-r.1
for
123425531
sbi-r.1
for
8078965
bdi-r.1
for
100835388


Ortholog ID: 5342
Species ghi ghi ghi ath bra bra bna bna bna cit gma gma gma vvi ppo ppo mtr sly sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC107910088 LOC107907405 LOC107905687 AT4G16490 LOC103869500 LOC103860854 LOC106391991 LOC106410891 LOC106440288 LOC102623778 LOC102670410 LOC100801642 LOC100792402 LOC100854922 LOC7455820 LOC7463687 LOC11407167 LOC101260811 LOC101259015 LOC102602037 LOC102593590 LOC107795669 LOC107777425 LOC107823151 LOC4343741 LOC100284324 LOC103647786 LOC123188136 LOC123052267 LOC123044402 LOC123425531 LOC8078965 LOC100835388
Function* U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 ARM repeat superfamily protein U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4-like U-box domain-containing protein 4-like U-box domain-containing protein 4-like U-box domain-containing protein 4 protein spotted leaf 11 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4-like U-box domain-containing protein 4 U-box domain-containing protein 4-like U-box domain-containing protein 4 uncharacterized LOC107795669 uncharacterized LOC107777425 uncharacterized LOC107823151 U-box domain-containing protein 4 uncharacterized LOC100284324 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4-like U-box domain-containing protein 4 U-box domain-containing protein 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 2
gma00710 Carbon fixation by Calvin cycle 2
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00053 Ascorbate and aldarate metabolism 4
sot00520 Amino sugar and nucleotide sugar metabolism 4
sot01240 Biosynthesis of cofactors 4
sot01250 Biosynthesis of nucleotide sugars 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 3
zma04075 Plant hormone signal transduction 3
zma00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04145 Phagosome 2
sbi04517 IgSF CAM signaling 2
sbi04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107910088 107907405 107905687 827347 103869500 103860854 106391991 106410891 106440288 102623778 102670410 100801642 100792402 100854922 7455820 7463687 11407167 101260811 101259015 102602037 102593590 107795669 107777425 107823151 4343741 100284324 103647786 123188136 123052267 123044402 123425531 8078965 100835388
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