ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107910477	ras-related protein Rab7
ath-u.5	RAB7A	RAB GTPase homolog 7A
ath-u.5	RABG3A	RAB GTPase homolog G3A
ath-u.5	RABG3B	RAB GTPase homolog G3B
gma-u.5	100785104	ras-related protein Rab7
gma-u.5	100499740	uncharacterized LOC100499740
vvi-u.5	100252781	ras-related protein Rab7
ppo-u.5	7468752	ras-related protein Rab7
ppo-u.5	7464784	ras-related protein Rab7
mtr-u.5	112417794	ras-related protein Rab7
mtr-u.5	25485026	ras-related protein Rab7
mtr-u.5	11436176	ras-related protein Rab7
sly-u.5	101257955	ras-related protein Rab7
osa-u.5	4339450	ras-related protein Rab7
osa-u.5	4325946	ras-related protein Rab7
zma-u.5	103630662	ras-related protein Rab7
zma-u.5	100193973	uncharacterized LOC100193973

Annotation

functional annotation

KEGG

ghi04144 [list] [network] Endocytosis (463 genes)

ghi04145 [list] [network] Phagosome (280 genes)

ghi04148 [list] [network] Efferocytosis (152 genes)

GO BP

GO CC

GO:0005774 [list] [network] vacuolar membrane

(246 genes)

IEA

GO MF

GO:0003924 [list] [network] GTPase activity	(613 genes)	IEA
GO:0005525 [list] [network] GTP binding	(687 genes)	IEA

Protein

XP_016693817.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, nucl 1, cyto 1, cyto_nucl 1

(predict for XP_016693817.2)

Subcellular
localization
TargetP

mito 7

(predict for XP_016693817.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107910477	ath-u.5 for RAB7A	ath-u.5 for RABG3A	ath-u.5 for RABG3B	gma-u.5 for 100785104	gma-u.5 for 100499740	vvi-u.5 for 100252781	ppo-u.5 for 7468752	ppo-u.5 for 7464784	mtr-u.5 for 112417794	mtr-u.5 for 25485026	mtr-u.5 for 11436176	sly-u.5 for 101257955	osa-u.5 for 4339450	osa-u.5 for 4325946	zma-u.5 for 103630662	zma-u.5 for 100193973

Ortholog

Ortholog ID: 3303

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

LOC107957510

LOC107945511

RAB7A

RABG3A

Function^*

ras-related protein Rab7

RAB GTPase homolog 7A

RAB GTPase homolog G3A

ras-related protein RABG3b

ras-related protein RABG3a

ras-related protein RABG2

ras-related protein RABG3b

ras-related protein Rab7

uncharacterized LOC100499740

ras-related protein Rab7

ras-related protein Rab7-like

ras-related protein Rab7

uncharacterized LOC100193973

ras-related protein Rab7

ras-related protein Rab7-like

ras-related protein Rab7

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	6
ghi04145	Phagosome	6
ghi04148	Efferocytosis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	2
ghi04145	Phagosome	2
ghi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	3
ath04141	Protein processing in endoplasmic reticulum	2
ath04145	Phagosome	2
ath04148	Efferocytosis	2
ath03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	3
bra04145	Phagosome	2
bra04148	Efferocytosis	2
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	3
bra04145	Phagosome	3
bra04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04144	Endocytosis	2
bna04145	Phagosome	2
bna04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04144	Endocytosis	2
bna04145	Phagosome	2
bna04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03050	Proteasome	3
cit04144	Endocytosis	3
cit04145	Phagosome	2
cit03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	4
gma00230	Purine metabolism	2
gma00730	Thiamine metabolism	2
gma01232	Nucleotide metabolism	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	7
mtr01230	Biosynthesis of amino acids	4
mtr00020	Citrate cycle (TCA cycle)	4
mtr04148	Efferocytosis	3
mtr00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	7
mtr01230	Biosynthesis of amino acids	4
mtr00020	Citrate cycle (TCA cycle)	4
mtr04148	Efferocytosis	3
mtr00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	3
sly04142	Lysosome	2
sly00190	Oxidative phosphorylation	2
sly04016	MAPK signaling pathway - plant	2
sly04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03050	Proteasome	4
sot04142	Lysosome	3
sot03013	Nucleocytoplasmic transport	2
sot03015	mRNA surveillance pathway	2
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04145	Phagosome	6
nta04144	Endocytosis	4
nta04148	Efferocytosis	4
nta04142	Lysosome	3
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04145	Phagosome	6
nta04144	Endocytosis	4
nta04148	Efferocytosis	4
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03060	Protein export	4
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01232	Nucleotide metabolism	4
zma01240	Biosynthesis of cofactors	4
zma00230	Purine metabolism	3
zma00730	Thiamine metabolism	3
zma00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	3
tae04145	Phagosome	3
tae04148	Efferocytosis	3
tae04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	6
tae04144	Endocytosis	3
tae04145	Phagosome	3
tae04148	Efferocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03050	Proteasome	10
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01240	Biosynthesis of cofactors	4
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03015	mRNA surveillance pathway	4
bdi04382	Cornified envelope formation	2

Expression

Expression pattern

Entrez Gene ID^*

107957510

107945511

816724

826558

103835692

103858535

106374425

106434191

102613154

100499740

100252781

7464784

7468752

112417794

25481755

101257955

102604562

107764770

107807915

4325946

4339450

103630662

100193973

123097097

123174228

123448354

123444266

8069790

100831841

100821204

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107910477 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107910477 (ghi-r.1 coexpression data)


Species	ghi	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	sot	nta	cre	tae
Paralog	1	3	2	1	2	3	1	2	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107910477 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107910477 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**