ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107910602	probable galacturonosyltransferase 7
ghi-r.1	107951052	probable galacturonosyltransferase 7
ghi-r.1	107928544	probable galacturonosyltransferase 7
ghi-r.1	107941829	probable galacturonosyltransferase 7
ath-u.5	GAUT7	galacturonosyltransferase 7
bra-r.6	103857802	probable galacturonosyltransferase 7
bra-r.6	103865678	probable galacturonosyltransferase 7
bra-r.6	103867087	probable galacturonosyltransferase 7
bna-r.1	106447677	probable galacturonosyltransferase 7
bna-r.1	106438139	probable galacturonosyltransferase 7
bna-r.1	106402353	probable galacturonosyltransferase 7
cit-r.1	102626111	probable galacturonosyltransferase 7
gma-u.5	100807309	probable galacturonosyltransferase 7
gma-u.5	100795264	probable galacturonosyltransferase 7
vvi-u.5	100245003	probable galacturonosyltransferase 7
ppo-u.5	18100052	probable galacturonosyltransferase 7
ppo-u.5	112324535	probable galacturonosyltransferase 7
mtr-u.5	11442107	probable galacturonosyltransferase 7
sly-u.5	101254852	probable galacturonosyltransferase 7
sot-r.1	102606291	probable galacturonosyltransferase 7
nta-r.1	107765771	putative galacturonosyltransferase 7
nta-r.1	107832467	putative galacturonosyltransferase 7
osa-u.5	4344307	probable galacturonosyltransferase 7
osa-u.5	4349640	probable galacturonosyltransferase 7
osa-u.5	4339139	probable galacturonosyltransferase 7
zma-u.5	100285437	uncharacterized LOC100285437
zma-u.5	100381610	uncharacterized LOC100381610
zma-u.5	103633569	uncharacterized LOC103633569
tae-r.2	123043665	probable galacturonosyltransferase 7
tae-r.2	123051430	probable galacturonosyltransferase 7
tae-r.2	123051538	probable galacturonosyltransferase 7
hvu-r.1	123424694	probable galacturonosyltransferase 7
hvu-r.1	123395636	probable galacturonosyltransferase 7
hvu-r.1	123448734	probable galacturonosyltransferase 7
sbi-r.1	8071457	probable galacturonosyltransferase 7
sbi-r.1	8078569	probable galacturonosyltransferase 7
sbi-r.1	8084555	probable galacturonosyltransferase 7
bdi-r.1	100823522	probable galacturonosyltransferase 7
bdi-r.1	100828240	probable galacturonosyltransferase 7
bdi-r.1	100833615	probable galacturonosyltransferase 7

Top 50 coexpressed genes to 107910602 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107910602 (ghi-r.1 coexpression data)

CoexMap"107910602"

[Cytoscape]

Annotation

functional annotation

KEGG

ghi00520 [list] [network] Amino sugar and nucleotide sugar metabolism (312 genes)

GO BP

GO CC

GO MF

GO:0047262 [list] [network] polygalacturonate 4-alpha-galacturonosyltransferase activity

(48 genes)

IEA

Protein

XP_016693988.2 [sequence] [blastp]
XP_016693989.2 [sequence] [blastp]
XP_016693990.2 [sequence] [blastp]
XP_016693991.2 [sequence] [blastp]
XP_016693992.2 [sequence] [blastp]
XP_016693993.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, vacu 4, nucl 1	(predict for XP_016693988.2)
chlo 4, vacu 4, nucl 1	(predict for XP_016693989.2)
vacu 4, chlo 3, nucl 1, cyto 1, plas 1, extr 1, E.R. 1, cyto_nucl 1, nucl_plas 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1	(predict for XP_016693990.2)
vacu 4, chlo 3, nucl 1, cyto 1, plas 1, extr 1, E.R. 1, cyto_nucl 1, nucl_plas 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1	(predict for XP_016693991.2)
chlo 4, vacu 4, nucl 1, extr 1, E.R. 1	(predict for XP_016693992.2)
chlo 4, vacu 4, nucl 1, extr 1, E.R. 1	(predict for XP_016693993.2)

Subcellular
localization
TargetP

mito 7	(predict for XP_016693988.2)
mito 7	(predict for XP_016693989.2)
mito 7	(predict for XP_016693990.2)
mito 7	(predict for XP_016693991.2)
mito 7	(predict for XP_016693992.2)
mito 7	(predict for XP_016693993.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107910602	ghi-r.1 for 107951052	ghi-r.1 for 107928544	ghi-r.1 for 107941829	ath-u.5 for GAUT7	bra-r.6 for 103857802	bra-r.6 for 103865678	bra-r.6 for 103867087	bna-r.1 for 106447677	bna-r.1 for 106438139	bna-r.1 for 106402353	cit-r.1 for 102626111	gma-u.5 for 100807309	gma-u.5 for 100795264	vvi-u.5 for 100245003	ppo-u.5 for 18100052	ppo-u.5 for 112324535	mtr-u.5 for 11442107	sly-u.5 for 101254852	sot-r.1 for 102606291	nta-r.1 for 107765771	nta-r.1 for 107832467	osa-u.5 for 4344307	osa-u.5 for 4349640	osa-u.5 for 4339139	zma-u.5 for 100285437	zma-u.5 for 100381610	zma-u.5 for 103633569	tae-r.2 for 123043665	tae-r.2 for 123051430	tae-r.2 for 123051538	hvu-r.1 for 123424694	hvu-r.1 for 123395636	hvu-r.1 for 123448734	sbi-r.1 for 8071457	sbi-r.1 for 8078569	sbi-r.1 for 8084555	bdi-r.1 for 100823522	bdi-r.1 for 100828240	bdi-r.1 for 100833615

Ortholog

Ortholog ID: 2710

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

GAUT7

Function^*

probable galacturonosyltransferase 7

galacturonosyltransferase 7

probable galacturonosyltransferase 7

putative galacturonosyltransferase 7

probable galacturonosyltransferase 7

uncharacterized LOC103633569

uncharacterized LOC100279186

uncharacterized LOC100192027

probable galacturonosyltransferase 7

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	4
ghi00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	4
ghi00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	4
ghi00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00520	Amino sugar and nucleotide sugar metabolism	3
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00520	Amino sugar and nucleotide sugar metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00520	Amino sugar and nucleotide sugar metabolism	4
bra04145	Phagosome	2
bra04148	Efferocytosis	2
bra04517	IgSF CAM signaling	2
bra04518	Integrin signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00520	Amino sugar and nucleotide sugar metabolism	9
bna00514	Other types of O-glycan biosynthesis	2
bna00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00520	Amino sugar and nucleotide sugar metabolism	8
bna00514	Other types of O-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00520	Amino sugar and nucleotide sugar metabolism	9
bna00514	Other types of O-glycan biosynthesis	2
bna00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00520	Amino sugar and nucleotide sugar metabolism	4
cit01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00520	Amino sugar and nucleotide sugar metabolism	2
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	3
ppo04120	Ubiquitin mediated proteolysis	2
ppo04141	Protein processing in endoplasmic reticulum	2
ppo03015	mRNA surveillance pathway	2
ppo04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04142	Lysosome	2
sot04144	Endocytosis	2
sot05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04145	Phagosome	3
nta04517	IgSF CAM signaling	3
nta04814	Motor proteins	3
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	3
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	6
osa03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00520	Amino sugar and nucleotide sugar metabolism	2
zma04075	Plant hormone signal transduction	2
zma00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00520	Amino sugar and nucleotide sugar metabolism	2
zma00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04814	Motor proteins	4
zma00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00520	Amino sugar and nucleotide sugar metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00520	Amino sugar and nucleotide sugar metabolism	3
tae04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00940	Phenylpropanoid biosynthesis	7
hvu00360	Phenylalanine metabolism	5
hvu00061	Fatty acid biosynthesis	2
hvu00620	Pyruvate metabolism	2
hvu00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00520	Amino sugar and nucleotide sugar metabolism	2
hvu01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00520	Amino sugar and nucleotide sugar metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00460	Cyanoamino acid metabolism	3
bdi00500	Starch and sucrose metabolism	3
bdi00999	Biosynthesis of various plant secondary metabolites	3
bdi00520	Amino sugar and nucleotide sugar metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

107910602

107951052

107941829

818447

103857802

103865678

103867087

106402353

106411041

106450964

102626111

100807309

100795264

100245003

18100052

112324535

11442107

101254852

102606291

107765771

107832467

4339139

4332727

4351364

103633569

100279186

100192027

123092240

123187460

123120394

123424694

123395636

123448734

8071457

8084555

8077021

100828240

100833615

100829314

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	1	3	3	1	2	1	2	1	1	1	2	3	3	3	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107910602 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107910602 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**