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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107910639   RING-H2 finger protein ATL58 
 ath-u.5   AT1G33480   RING/U-box superfamily protein 
 gma-u.5   100794211   RING-H2 finger protein ATL7 
 vvi-u.5   100251770   RING-H2 finger protein ATL7 
 ppo-u.5   7479021   RING-H2 finger protein ATL7 
 mtr-u.5   11432862   RING-H2 finger protein ATL58 
 sly-u.5   101251996   RING-H2 finger protein ATL7 
 osa-u.5   4329673   RING-H2 finger protein ATL58 
 zma-u.5   100192737   RING-H2 finger protein ATL7 

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Top 50 coexpressed genes to 107910639 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107910639 (ghi-r.1 coexpression data)

CoexMap"107910639"


ghiLOC107910639 | Entrez gene ID : 107910639    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (962 genes)  IEA  
GO CC
GO MF
GO:0016740 [list] [network] transferase activity  (8317 genes)  IEA  
Protein XP_016694057.1 [sequence] [blastp]
XP_016694058.1 [sequence] [blastp]
XP_040944680.1 [sequence] [blastp]
XP_040944681.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  extr 3,  plas 1,  nucl 1,  vacu 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_016694057.1)
nucl 4,  chlo 3,  cyto 1,  mito 1,  extr 1,  pero 1,  cysk 1,  cyto_pero 1  (predict for XP_016694058.1)
chlo 4,  extr 3,  plas 1,  nucl 1,  vacu 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_040944680.1)
nucl 4,  chlo 3,  cyto 1,  mito 1,  extr 1,  pero 1,  cysk 1,  cyto_pero 1  (predict for XP_040944681.1)
Subcellular
localization
TargetP
other 6  (predict for XP_016694057.1)
other 9  (predict for XP_016694058.1)
other 6  (predict for XP_040944680.1)
other 9  (predict for XP_040944681.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107910639
ath-u.5
for
AT1G33480
gma-u.5
for
100794211
vvi-u.5
for
100251770
ppo-u.5
for
7479021
mtr-u.5
for
11432862
sly-u.5
for
101251996
osa-u.5
for
4329673
zma-u.5
for
100192737


Ortholog ID: 7645
Species ghi ghi ath bra cit gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC107887119 LOC107910639 AT1G33480 LOC103840059 LOC102626499 LOC100794211 LOC100251770 LOC7479021 LOC11432862 LOC101251996 LOC102580434 LOC107825930 LOC107820903 LOC4329673 LOC100192737 LOC123129601 LOC123137165 LOC123401595 LOC8068887 LOC100828709
Function* RING-H2 finger protein ATL7 RING-H2 finger protein ATL58 RING/U-box superfamily protein RING-H2 finger protein ATL58 RING-H2 finger protein ATL7-like RING-H2 finger protein ATL7 RING-H2 finger protein ATL7 RING-H2 finger protein ATL7 RING-H2 finger protein ATL58 RING-H2 finger protein ATL7 RING-H2 finger protein ATL7 uncharacterized LOC107825930 RING-H2 finger protein ATL7 RING-H2 finger protein ATL58 RING-H2 finger protein ATL7 RING-H2 finger protein ATL7 RING-H2 finger protein ATL58 RING-H2 finger protein ATL58-like RING-H2 finger protein ATL58 RING-H2 finger protein ATL7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01212 Fatty acid metabolism 4
ath00062 Fatty acid elongation 4
ath01040 Biosynthesis of unsaturated fatty acids 3
ath00071 Fatty acid degradation 2
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 3
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00020 Citrate cycle (TCA cycle) 3
gma00270 Cysteine and methionine metabolism 3
gma00566 Sulfoquinovose metabolism 3
gma00620 Pyruvate metabolism 3
gma00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00100 Steroid biosynthesis 2
sot00561 Glycerolipid metabolism 2
sot00564 Glycerophospholipid metabolism 2
sot00565 Ether lipid metabolism 2
sot00590 Arachidonic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00020 Citrate cycle (TCA cycle) 3
zma00190 Oxidative phosphorylation 3
zma01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 2
tae00906 Carotenoid biosynthesis 2
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107887119 107910639 840242 103840059 102626499 100794211 100251770 7479021 11432862 101251996 102580434 107825930 107820903 4329673 100192737 123129601 123137165 123401595 8068887 100828709
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