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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107911282   uncharacterized protein At4g10930 
 ath-u.5   AT4G10930   RING/U-box protein 
 gma-u.5   100808102   uncharacterized protein At4g10930 
 gma-u.5   100783955   uncharacterized protein At4g10930 
 vvi-u.5   100254675   uncharacterized protein At4g10930 
 ppo-u.5   7467078   uncharacterized protein At4g10930 
 mtr-u.5   25502204   uncharacterized protein At4g10930 
 sly-u.5   101262701   uncharacterized protein At4g10930 
 osa-u.5   4351771   uncharacterized protein At4g10930 
 zma-u.5   103656040   uncharacterized protein At4g10930 

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Top 50 coexpressed genes to 107911282 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107911282 (ghi-r.1 coexpression data)

CoexMap"107911282"


ghiLOC107911282 | Entrez gene ID : 107911282    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (962 genes)  IEA  
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (513 genes)  IEA  
Protein XP_016694642.2 [sequence] [blastp]
XP_016694649.2 [sequence] [blastp]
XP_040954113.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_016694642.2)
nucl 10  (predict for XP_016694649.2)
nucl 9  (predict for XP_040954113.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016694642.2)
other 9  (predict for XP_016694649.2)
other 7  (predict for XP_040954113.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107911282
ath-u.5
for
AT4G10930
gma-u.5
for
100808102
gma-u.5
for
100783955
vvi-u.5
for
100254675
ppo-u.5
for
7467078
mtr-u.5
for
25502204
sly-u.5
for
101262701
osa-u.5
for
4351771
zma-u.5
for
103656040


Ortholog ID: 10177
Species ghi ghi ath bra bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC107911282 LOC107946959 AT4G10930 LOC103858584 LOC106388542 LOC106438806 LOC102629005 LOC100783955 LOC100808102 LOC100254675 LOC7467078 LOC25502204 LOC101262701 LOC102581149 LOC107794701 LOC107769779 LOC4351771 LOC103656040 LOC123062046 LOC123070767 LOC123444296 LOC8069935 LOC100827572 CHLRE_13g572100v5
Function* uncharacterized protein At4g10930 uncharacterized protein At4g10930 RING/U-box protein uncharacterized protein At4g10930 uncharacterized protein At4g10930 uncharacterized protein At4g10930-like uncharacterized protein At4g10930 uncharacterized protein At4g10930 uncharacterized protein At4g10930 uncharacterized protein At4g10930 uncharacterized protein At4g10930 uncharacterized protein At4g10930 uncharacterized protein At4g10930 uncharacterized protein At4g10930 uncharacterized protein At4g10930-like uncharacterized protein At4g10930 uncharacterized protein At4g10930 uncharacterized protein At4g10930 uncharacterized protein At4g10930 uncharacterized protein At4g10930 uncharacterized protein At4g10930 uncharacterized protein At4g10930 uncharacterized protein At4g10930 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 5
bna04814 Motor proteins 2
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 5
bna04814 Motor proteins 2
bna03013 Nucleocytoplasmic transport 2
bna03040 Spliceosome 2
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00310 Lysine degradation 3
tae03083 Polycomb repressive complex 3
tae03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae00310 Lysine degradation 3
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107911282 107946959 826692 103858584 106388542 106438806 102629005 100783955 100808102 100254675 7467078 25502204 101262701 102581149 107794701 107769779 4351771 103656040 123062046 123070767 123444296 8069935 100827572 66055950
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