ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	AT3G06240	F-box family protein
ath-u.5	AT3G07870	F-box and associated interaction domains-containing protein
ath-u.5	AT3G23880	F-box and associated interaction domains-containing protein
gma-u.5	102666785	F-box/kelch-repeat protein At3g17530
ppo-u.5	7455978	F-box protein At3g07870
ppo-u.5	7455824	F-box protein CPR1
sly-u.5	101267558	F-box/F-box associated protein

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0004523 [list] [network] RNA-DNA hybrid ribonuclease activity	(349 genes)	IEA
GO:0003676 [list] [network] nucleic acid binding	(9083 genes)	IEA
GO:0005515 [list] [network] protein binding	(10797 genes)	IEA

Protein

XP_016694651.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, E.R. 2, cyto_nucl 2, cyto_pero 2

(predict for XP_016694651.2)

Subcellular
localization
TargetP

other 9

(predict for XP_016694651.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT3G06240	ath-u.5 for AT3G07870	ath-u.5 for AT3G23880	gma-u.5 for 102666785	ppo-u.5 for 7455978	ppo-u.5 for 7455824	sly-u.5 for 101267558

Ortholog ID: 25

Species

ghi

ath

bna

gma

mtr

sly

sot

nta

bdi

Symbol

Function^*

F-box/kelch-repeat protein At3g06240

F-box and associated interaction domains-containing protein

F-box family protein

F-box protein At3g07870-like

putative F-box protein

F-box protein CPR1

F-box/kelch-repeat protein At3g23880

F-box/kelch-repeat protein At3g23880-like

F-box/kelch-repeat protein At3g06240-like

F-box/kelch-repeat protein At3g23880

F-box/kelch-repeat protein At3g23880-like

F-box/LRR-repeat protein At2g43260

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04142	Lysosome	4
bna00480	Glutathione metabolism	2
bna00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	2
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	4
nta03430	Mismatch repair	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	2

Expression

Expression pattern

Entrez Gene ID^*

107888906

819978

819798

106388992

100789250

100789763

25483269

101244418

107062273

107824897

107792385

100823474

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT3G06240 (ath-u.5 coexpression data)

Top 50 enrichment test to AT3G06240 (ath-u.5 coexpression data)


Species	ath	gma	ppo	sly	bdi	mtr	bra	hvu	vvi	cit	bna	sbi	ghi	osa	sot	nta	cre	tae	zma
Paralog	3	1	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT3G06240 (ath-u.5 coexpression data)

Top 50 enrichment test to AT3G06240 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**