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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107912002   pentatricopeptide repeat-containing protein At2g01390 
 ath-u.5   EMB3111   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100802423   pentatricopeptide repeat-containing protein At2g01390 
 vvi-u.5   100256542   pentatricopeptide repeat-containing protein At2g01390 
 mtr-u.5   11415766   pentatricopeptide repeat-containing protein At2g01390 
 sly-u.5   101265055   pentatricopeptide repeat-containing protein At2g01390 
 osa-u.5   4348438   pentatricopeptide repeat-containing protein At2g01390 
 zma-u.5   100279199   uncharacterized LOC100279199 

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Top 50 coexpressed genes to 107912002 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107912002 (ghi-r.1 coexpression data)

CoexMap"107912002"


ghiLOC107912002 | Entrez gene ID : 107912002    
Species ghi ath gma vvi mtr sly osa zma bdi hvu bra cit bna ppo sbi sot nta cre tae
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016695519.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 3,  nucl 2  (predict for XP_016695519.2)
Subcellular
localization
TargetP
mito 8  (predict for XP_016695519.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107912002
ath-u.5
for
EMB3111
gma-u.5
for
100802423
vvi-u.5
for
100256542
mtr-u.5
for
11415766
sly-u.5
for
101265055
osa-u.5
for
4348438
zma-u.5
for
100279199


Ortholog ID: 8859
Species ghi ghi ath bra bna bna cit gma vvi mtr sly sot nta nta osa zma hvu sbi bdi
Symbol LOC121209657 LOC107912002 EMB3111 LOC103827591 LOC106349458 LOC106407315 LOC102628183 LOC100802423 LOC100256542 LOC11415766 LOC101265055 LOC102595430 LOC107832206 LOC107829424 LOC4348438 LOC100279199 LOC123413586 LOC8058497 LOC100831512
Function* pentatricopeptide repeat-containing protein At2g01390 pentatricopeptide repeat-containing protein At2g01390 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g01390 pentatricopeptide repeat-containing protein At2g01390 pentatricopeptide repeat-containing protein At2g01390 pentatricopeptide repeat-containing protein At2g01390 pentatricopeptide repeat-containing protein At2g01390 pentatricopeptide repeat-containing protein At2g01390 pentatricopeptide repeat-containing protein At2g01390 pentatricopeptide repeat-containing protein At2g01390 pentatricopeptide repeat-containing protein At2g01390 pentatricopeptide repeat-containing protein At2g01390-like pentatricopeptide repeat-containing protein At2g01390 pentatricopeptide repeat-containing protein At2g01390 uncharacterized LOC100279199 pentatricopeptide repeat-containing protein At2g01390-like pentatricopeptide repeat-containing protein At2g01390 pentatricopeptide repeat-containing protein At2g01390
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
mtr00860 Porphyrin metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 3
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 4
bdi00460 Cyanoamino acid metabolism 2
bdi00999 Biosynthesis of various plant secondary metabolites 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121209657 107912002 814667 103827591 106349458 106407315 102628183 100802423 100256542 11415766 101265055 102595430 107832206 107829424 4348438 100279199 123413586 8058497 100831512
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