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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107912018   60S ribosomal protein L9 
 ath-u.5   AT4G10450   Ribosomal protein L6 family 
 ath-u.5   AT1G33120   Ribosomal protein L6 family 
 ath-u.5   PGY2   Ribosomal protein L6 family 
 gma-u.5   100810086   60S ribosomal protein L9-like 
 gma-u.5   100810611   60S ribosomal protein L9 
 gma-u.5   100811498   60S ribosomal protein L9-like 
 vvi-u.5   100253227   large ribosomal subunit protein uL6 
 vvi-u.5   100252127   large ribosomal subunit protein uL6 
 ppo-u.5   7490733   60S ribosomal protein L9 
 ppo-u.5   112325287   60S ribosomal protein L9-like 
 ppo-u.5   7490730   60S ribosomal protein L9 
 mtr-u.5   11419474   60S ribosomal protein L9 
 mtr-u.5   11405426   60S ribosomal protein L9 
 sly-u.5   101257196   large ribosomal subunit protein uL6z/uL6y 
 sly-u.5   101251592   large ribosomal subunit protein uL6z/uL6y 
 sly-u.5   101249254   large ribosomal subunit protein uL6z/uL6y 
 osa-u.5   4327999   large ribosomal subunit protein uL6-like 
 osa-u.5   4347422   60S ribosomal protein L9-like 
 zma-u.5   100280993   60S ribosomal protein L9 
 zma-u.5   100283325   60S ribosomal protein L9-like 
 zma-u.5   100284304   60S ribosomal protein L9-like 

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Top 50 coexpressed genes to 107912018 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107912018 (ghi-r.1 coexpression data)

CoexMap"107912018"


ghiLOC107912018 | Entrez gene ID : 107912018    
Species ghi ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna
Paralog 1 3 3 2 3 2 3 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0002181 [list] [network] cytoplasmic translation  (214 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (467 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0019843 [list] [network] rRNA binding  (209 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_016695541.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  nucl 1  (predict for XP_016695541.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016695541.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107912018

.
ath-u.5
for
AT4G10450

.
ath-u.5
for
AT1G33120

.
ath-u.5
for
PGY2

.
gma-u.5
for
100810086

.
gma-u.5
for
100810611

.
gma-u.5
for
100811498

.
vvi-u.5
for
100253227

.
vvi-u.5
for
100252127

.
ppo-u.5
for
7490733

.
ppo-u.5
for
112325287

.
ppo-u.5
for
7490730

.
mtr-u.5
for
11419474

.
mtr-u.5
for
11405426

.
sly-u.5
for
101257196

.
sly-u.5
for
101251592

.
sly-u.5
for
101249254

.
osa-u.5
for
4327999

.
osa-u.5
for
4347422

.
zma-u.5
for
100280993

.
zma-u.5
for
100283325

.
zma-u.5
for
100284304

.


Ortholog ID: 1585
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot sot cit cit bdi bdi nta nta
Symbol AT4G10450 AT1G33120 LOC100810086 LOC100500079 LOC101251592 LOC101249254 LOC4347422 LOC4327999 LOC100284304 LOC100280993 LOC103848821 LOC103848616 LOC100253227 LOC100252127 LOC7455012 LOC7455017 LOC11419474 LOC11405426 LOC123068185 LOC123068189 LOC123442369 LOC123442370 LOC107944720 LOC107904536 LOC106406948 LOC106390118 CHLRE_12g494050v5 LOC8067894 LOC102599440 LOC102596885 LOC102631347 LOC102623433 LOC100834080 LOC100833190 LOC107769103 LOC107767112
Function* Ribosomal protein L6 family Ribosomal protein L6 family 60S ribosomal protein L9-like uncharacterized LOC100500079 large ribosomal subunit protein uL6z/uL6y large ribosomal subunit protein uL6z/uL6y 60S ribosomal protein L9-like large ribosomal subunit protein uL6-like 60S ribosomal protein L9-like 60S ribosomal protein L9 60S ribosomal protein L9-1 60S ribosomal protein L9-1 large ribosomal subunit protein uL6 large ribosomal subunit protein uL6 60S ribosomal protein L9 60S ribosomal protein L9 60S ribosomal protein L9 60S ribosomal protein L9 60S ribosomal protein L9 60S ribosomal protein L9 60S ribosomal protein L9 60S ribosomal protein L9 60S ribosomal protein L9 60S ribosomal protein L9 60S ribosomal protein L9-1-like 60S ribosomal protein L9-2 ribosomal protein L9 60S ribosomal protein L9 60S ribosomal protein L9-1-like 60S ribosomal protein L9-1-like 60S ribosomal protein L9-like 60S ribosomal protein L9 60S ribosomal protein L9 60S ribosomal protein L9 large ribosomal subunit protein uL6z/uL6y large ribosomal subunit protein uL6z/uL6y
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
ath03008 Ribosome biogenesis in eukaryotes 4
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 8
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
bdi00240 Pyrimidine metabolism 2
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
nta03015 mRNA surveillance pathway 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826637 840208 100810086 100500079 101251592 101249254 4347422 4327999 100284304 100280993 103848821 103848616 100253227 100252127 7455012 7455017 11419474 11405426 123068185 123068189 123442369 123442370 107944720 107904536 106406948 106390118 5726114 8067894 102599440 102596885 102631347 102623433 100834080 100833190 107769103 107767112
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