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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107912129   malate dehydrogenase, chloroplastic 
 ath-u.5   mMDH2   Lactate/malate dehydrogenase family protein 
 ath-u.5   MDH   malate dehydrogenase 
 ath-u.5   mMDH1   Lactate/malate dehydrogenase family protein 
 gma-u.5   MDH-1   malate dehydrogenase 
 gma-u.5   100783173   malate dehydrogenase, chloroplastic 
 gma-u.5   100777296   malate dehydrogenase, mitochondrial-like 
 vvi-u.5   100247511   malate dehydrogenase, chloroplastic 
 vvi-u.5   100265585   malate dehydrogenase, chloroplastic 
 vvi-u.5   100253724   malate dehydrogenase, mitochondrial-like 
 ppo-u.5   7471892   malate dehydrogenase, mitochondrial 
 ppo-u.5   18097666   malate dehydrogenase, chloroplastic 
 ppo-u.5   18107367   malate dehydrogenase, chloroplastic 
 mtr-u.5   120580136   malate dehydrogenase, chloroplastic 
 mtr-u.5   25502524   malate dehydrogenase, mitochondrial 
 sly-u.5   101248141   malate dehydrogenase, chloroplastic 
 sly-u.5   mMDH2   malate dehydrogenase 2 
 sly-u.5   101258932   malate dehydrogenase, chloroplastic 
 osa-u.5   4339682   malate dehydrogenase, mitochondrial 
 osa-u.5   4343993   malate dehydrogenase, chloroplastic 
 osa-u.5   4345657   malate dehydrogenase, chloroplastic 
 zma-u.5   100193663   malate dehydrogenase 
 zma-u.5   100193743   Malate dehydrogenase 
 zma-u.5   100274264   malate dehydrogenase 2 

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Top 50 coexpressed genes to 107912129 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107912129 (ghi-r.1 coexpression data)

CoexMap"107912129"


ghiLOC107912129 | Entrez gene ID : 107912129    
Species ghi ath gma vvi ppo mtr sly osa zma cre cit hvu bdi sot bra sbi tae nta bna
Paralog 1 3 3 3 3 2 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00020 [list] [network] Citrate cycle (TCA cycle) (143 genes)
ghi00270 [list] [network] Cysteine and methionine metabolism (291 genes)
ghi00566 [list] [network] Sulfoquinovose metabolism (29 genes)
ghi00620 [list] [network] Pyruvate metabolism (290 genes)
ghi00630 [list] [network] Glyoxylate and dicarboxylate metabolism (192 genes)
ghi00710 [list] [network] Carbon fixation by Calvin cycle (194 genes)
ghi01200 [list] [network] Carbon metabolism (681 genes)
GO BP
GO:0006108 [list] [network] malate metabolic process  (59 genes)  IEA  
GO:0006099 [list] [network] tricarboxylic acid cycle  (119 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (1525 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (13864 genes)  IEA  
GO MF
GO:0030060 [list] [network] L-malate dehydrogenase (NAD+) activity  (23 genes)  IEA  
Protein XP_016695683.1 [sequence] [blastp]
XP_016695684.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_016695683.1)
chlo 9  (predict for XP_016695684.1)
Subcellular
localization
TargetP
chlo 6,  mito 3  (predict for XP_016695683.1)
chlo 6,  mito 3  (predict for XP_016695684.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107912129

.
ath-u.5
for
mMDH2

.
ath-u.5
for
MDH

.
ath-u.5
for
mMDH1

.
gma-u.5
for
MDH-1

.
gma-u.5
for
100783173

.
gma-u.5
for
100777296

.
vvi-u.5
for
100247511

.
vvi-u.5
for
100265585

.
vvi-u.5
for
100253724

.
ppo-u.5
for
7471892

.
ppo-u.5
for
18097666

.
ppo-u.5
for
18107367

.
mtr-u.5
for
120580136

.
mtr-u.5
for
25502524

.
sly-u.5
for
101248141

.
sly-u.5
for
mMDH2

.
sly-u.5
for
101258932

.
osa-u.5
for
4339682

.
osa-u.5
for
4343993

.
osa-u.5
for
4345657

.
zma-u.5
for
100193663

.
zma-u.5
for
100193743

.
zma-u.5
for
100274264

.


Ortholog ID: 956
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre cre sbi sot sot cit cit bdi bdi nta nta
Symbol mMDH1 MDH MDH-1 LOC100783173 mMDH2 mMDH1 LOC4345657 LOC4326249 LOC100272900 LOC100273428 LOC103868444 LOC103832683 LOC100253724 LOC100265585 LOC18097666 LOC7456259 LOC120580136 LOC25502524 LOC123148291 LOC123070231 LOC123407884 LOC123443983 LOC121202959 LOC107886143 LOC106451462 LOC106395698 CHLRE_12g483950v5 CHLRE_03g194850v5 LOC8083786 LOC102598930 LOC102606140 LOC102628532 LOC102617795 LOC100838923 LOC100832550 LOC107791360 LOC107791114
Function* Lactate/malate dehydrogenase family protein malate dehydrogenase malate dehydrogenase malate dehydrogenase, chloroplastic malate dehydrogenase 2 malate dehydrogenase 1 malate dehydrogenase, chloroplastic malate dehydrogenase, mitochondrial malate dehydrogenase3 uncharacterized LOC100273428 malate dehydrogenase 1, mitochondrial malate dehydrogenase 1, mitochondrial malate dehydrogenase, mitochondrial-like malate dehydrogenase, chloroplastic malate dehydrogenase, chloroplastic malate dehydrogenase, mitochondrial malate dehydrogenase, chloroplastic malate dehydrogenase, mitochondrial malate dehydrogenase, chloroplastic malate dehydrogenase 1, mitochondrial malate dehydrogenase, chloroplastic-like malate dehydrogenase 1, mitochondrial-like malate dehydrogenase, chloroplastic malate dehydrogenase, chloroplastic malate dehydrogenase 1, mitochondrial malate dehydrogenase, chloroplastic uncharacterized protein uncharacterized protein malate dehydrogenase, mitochondrial malate dehydrogenase, chloroplastic malate dehydrogenase, mitochondrial-like malate dehydrogenase, chloroplastic malate dehydrogenase, mitochondrial malate dehydrogenase, chloroplastic malate dehydrogenase 1, mitochondrial malate dehydrogenase, chloroplastic-like malate dehydrogenase, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 5
ath00270 Cysteine and methionine metabolism 4
ath01200 Carbon metabolism 4
ath00230 Purine metabolism 3
ath00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 6
ath01240 Biosynthesis of cofactors 4
ath00030 Pentose phosphate pathway 3
ath00480 Glutathione metabolism 3
ath00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 9
gma01200 Carbon metabolism 9
gma00010 Glycolysis / Gluconeogenesis 5
gma01230 Biosynthesis of amino acids 5
gma00020 Citrate cycle (TCA cycle) 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03050 Proteasome 2
gma00230 Purine metabolism 2
gma00250 Alanine, aspartate and glutamate metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 5
sly00270 Cysteine and methionine metabolism 3
sly00620 Pyruvate metabolism 3
sly00710 Carbon fixation by Calvin cycle 3
sly00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00020 Citrate cycle (TCA cycle) 6
sly01200 Carbon metabolism 6
sly00620 Pyruvate metabolism 5
sly00630 Glyoxylate and dicarboxylate metabolism 5
sly00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 5
osa00620 Pyruvate metabolism 2
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 8
osa00020 Citrate cycle (TCA cycle) 6
osa01200 Carbon metabolism 6
osa01210 2-Oxocarboxylic acid metabolism 4
osa00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 7
zma00061 Fatty acid biosynthesis 5
zma01212 Fatty acid metabolism 5
zma00780 Biotin metabolism 4
zma01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 7
zma00020 Citrate cycle (TCA cycle) 5
zma01200 Carbon metabolism 5
zma00270 Cysteine and methionine metabolism 4
zma00566 Sulfoquinovose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 6
bra00710 Carbon fixation by Calvin cycle 4
bra00020 Citrate cycle (TCA cycle) 3
bra00270 Cysteine and methionine metabolism 3
bra00566 Sulfoquinovose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 10
bra00710 Carbon fixation by Calvin cycle 7
bra00020 Citrate cycle (TCA cycle) 6
bra01230 Biosynthesis of amino acids 5
bra00270 Cysteine and methionine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 4
vvi03018 RNA degradation 3
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
vvi00510 N-Glycan biosynthesis 2
vvi00513 Various types of N-glycan biosynthesis 2
vvi04142 Lysosome 2
vvi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00270 Cysteine and methionine metabolism 4
ppo00020 Citrate cycle (TCA cycle) 3
ppo00566 Sulfoquinovose metabolism 3
ppo00620 Pyruvate metabolism 3
ppo00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 6
ppo00190 Oxidative phosphorylation 4
ppo00020 Citrate cycle (TCA cycle) 4
ppo00620 Pyruvate metabolism 4
ppo00710 Carbon fixation by Calvin cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 6
mtr00010 Glycolysis / Gluconeogenesis 5
mtr01230 Biosynthesis of amino acids 5
mtr00710 Carbon fixation by Calvin cycle 4
mtr00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 9
mtr00020 Citrate cycle (TCA cycle) 3
mtr01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 6
tae00270 Cysteine and methionine metabolism 6
tae00566 Sulfoquinovose metabolism 6
tae00620 Pyruvate metabolism 6
tae00630 Glyoxylate and dicarboxylate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 6
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
tae00020 Citrate cycle (TCA cycle) 3
tae00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 11
hvu00710 Carbon fixation by Calvin cycle 7
hvu01230 Biosynthesis of amino acids 6
hvu00020 Citrate cycle (TCA cycle) 5
hvu00630 Glyoxylate and dicarboxylate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 4
hvu00020 Citrate cycle (TCA cycle) 3
hvu00270 Cysteine and methionine metabolism 3
hvu04141 Protein processing in endoplasmic reticulum 3
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00020 Citrate cycle (TCA cycle) 6
ghi00270 Cysteine and methionine metabolism 6
ghi00566 Sulfoquinovose metabolism 6
ghi00620 Pyruvate metabolism 6
ghi00630 Glyoxylate and dicarboxylate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00020 Citrate cycle (TCA cycle) 6
ghi00270 Cysteine and methionine metabolism 6
ghi00566 Sulfoquinovose metabolism 6
ghi00620 Pyruvate metabolism 6
ghi00630 Glyoxylate and dicarboxylate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 7
bna00270 Cysteine and methionine metabolism 7
bna00566 Sulfoquinovose metabolism 7
bna00620 Pyruvate metabolism 7
bna00630 Glyoxylate and dicarboxylate metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01200 Carbon metabolism 6
bna00030 Pentose phosphate pathway 4
bna00480 Glutathione metabolism 4
bna00053 Ascorbate and aldarate metabolism 2
bna00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 12
cre00020 Citrate cycle (TCA cycle) 11
cre01210 2-Oxocarboxylic acid metabolism 4
cre00640 Propanoate metabolism 3
cre00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 5
sbi00020 Citrate cycle (TCA cycle) 5
sbi01200 Carbon metabolism 5
sbi00620 Pyruvate metabolism 4
sbi00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 9
sot00010 Glycolysis / Gluconeogenesis 6
sot01230 Biosynthesis of amino acids 6
sot00710 Carbon fixation by Calvin cycle 6
sot00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 9
sot04141 Protein processing in endoplasmic reticulum 4
sot04145 Phagosome 3
sot00020 Citrate cycle (TCA cycle) 2
sot00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 7
cit00710 Carbon fixation by Calvin cycle 5
cit00190 Oxidative phosphorylation 4
cit00270 Cysteine and methionine metabolism 4
cit00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00620 Pyruvate metabolism 3
cit00710 Carbon fixation by Calvin cycle 3
cit01200 Carbon metabolism 3
cit00190 Oxidative phosphorylation 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 3
bdi00010 Glycolysis / Gluconeogenesis 3
bdi00052 Galactose metabolism 2
bdi00500 Starch and sucrose metabolism 2
bdi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00020 Citrate cycle (TCA cycle) 6
bdi01200 Carbon metabolism 6
bdi00620 Pyruvate metabolism 5
bdi00190 Oxidative phosphorylation 4
bdi00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 6
nta04141 Protein processing in endoplasmic reticulum 5
nta00710 Carbon fixation by Calvin cycle 4
nta01200 Carbon metabolism 4
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 8
nta01230 Biosynthesis of amino acids 6
nta00710 Carbon fixation by Calvin cycle 6
nta00010 Glycolysis / Gluconeogenesis 4
nta00020 Citrate cycle (TCA cycle) 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841757 823906 606509 100783173 101258530 778285 4345657 4326249 100272900 100273428 103868444 103832683 100253724 100265585 18097666 7456259 120580136 25502524 123148291 123070231 123407884 123443983 121202959 107886143 106451462 106395698 5728707 5718730 8083786 102598930 102606140 102628532 102617795 100838923 100832550 107791360 107791114
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