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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107912168   26S proteasome non-ATPase regulatory subunit 13 homolog B 
 ghi-r.1   107919967   26S proteasome non-ATPase regulatory subunit 13 homolog B 
 ghi-r.1   107938579   26S proteasome non-ATPase regulatory subunit 13 homolog A 
 ghi-r.1   107930643   26S proteasome non-ATPase regulatory subunit 13 homolog B 
 ath-u.5   AT4G19006   Proteasome component (PCI) domain protein 
 ath-u.5   AT5G45620   Proteasome component (PCI) domain protein 
 bra-r.6   103834095   26S proteasome non-ATPase regulatory subunit 13 homolog B 
 bra-r.6   103827785   26S proteasome non-ATPase regulatory subunit 13 homolog A 
 bna-r.1   125595398   26S proteasome non-ATPase regulatory subunit 13 homolog B-like 
 bna-r.1   106360928   26S proteasome non-ATPase regulatory subunit 13 homolog B 
 bna-r.1   106375372   26S proteasome non-ATPase regulatory subunit 13 homolog A 
 cit-r.1   102617648   26S proteasome non-ATPase regulatory subunit 13 homolog B 
 gma-u.5   100804455   26S proteasome non-ATPase regulatory subunit 13-like 
 gma-u.5   100793480   26S proteasome non-ATPase regulatory subunit 13-like 
 vvi-u.5   100252379   26S proteasome non-ATPase regulatory subunit 13 homolog A 
 ppo-u.5   7456105   26S proteasome non-ATPase regulatory subunit 13 homolog A 
 ppo-u.5   18094107   26S proteasome non-ATPase regulatory subunit 13 homolog B 
 mtr-u.5   11415720   26S proteasome non-ATPase regulatory subunit 13 homolog B 
 sly-u.5   101264976   26S proteasome non-ATPase regulatory subunit 13 homolog B 
 sly-u.5   101245654   26S proteasome non-ATPase regulatory subunit 13 homolog B 
 sot-r.1   102598387   26S proteasome non-ATPase regulatory subunit 13 homolog B 
 sot-r.1   102599949   26S proteasome non-ATPase regulatory subunit 13 homolog B-like 
 nta-r.1   107779673   26S proteasome non-ATPase regulatory subunit 13 homolog B 
 nta-r.1   107822910   26S proteasome non-ATPase regulatory subunit 13 homolog B 
 nta-r.1   107806446   26S proteasome non-ATPase regulatory subunit 13 homolog B-like 
 osa-u.5   4332055   26S proteasome non-ATPase regulatory subunit 13 homolog B 
 osa-u.5   4324031   26S proteasome non-ATPase regulatory subunit 13 homolog B 
 zma-u.5   100285832   26S proteasome non-ATPase regulatory subunit 13 
 zma-u.5   100283395   26S proteasome non-ATPase regulatory subunit 13 homolog A 
 tae-r.2   123046605   26S proteasome non-ATPase regulatory subunit 13 homolog B 
 tae-r.2   123050695   26S proteasome non-ATPase regulatory subunit 13 homolog B 
 tae-r.2   123126429   26S proteasome non-ATPase regulatory subunit 13 homolog B 
 hvu-r.1   123427774   26S proteasome non-ATPase regulatory subunit 13 homolog B-like 
 hvu-r.1   123436738   26S proteasome non-ATPase regulatory subunit 13 homolog B-like 
 sbi-r.1   110431646   26S proteasome non-ATPase regulatory subunit 13 homolog B-like 
 bdi-r.1   100841254   26S proteasome non-ATPase regulatory subunit 13 homolog B 
 bdi-r.1   100833650   26S proteasome non-ATPase regulatory subunit 13 homolog B 
 cre-r.1   CHLRE_17g734516v5   uncharacterized protein 

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Top 50 coexpressed genes to 107912168 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107912168 (ghi-r.1 coexpression data)

CoexMap"107912168"


ghiLOC107912168 | Entrez gene ID : 107912168    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 3 1 2 1 2 1 2 2 3 2 2 3 2 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03050 [list] [network] Proteasome (162 genes)
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (782 genes)  IEA  
GO CC
GO:0008541 [list] [network] proteasome regulatory particle, lid subcomplex  (32 genes)  IEA  
GO:0005829 [list] [network] cytosol  (2580 genes)  IEA  
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0005198 [list] [network] structural molecule activity  (1439 genes)  IEA  
Protein XP_016695728.1 [sequence] [blastp]
XP_016695729.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 4,  chlo 1  (predict for XP_016695728.1)
nucl 4,  cyto 3,  chlo 2,  cyto_plas 2  (predict for XP_016695729.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016695728.1)
other 9  (predict for XP_016695729.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107912168
ghi-r.1
for
107919967
ghi-r.1
for
107938579
ghi-r.1
for
107930643
ath-u.5
for
AT4G19006
ath-u.5
for
AT5G45620
bra-r.6
for
103834095
bra-r.6
for
103827785
bna-r.1
for
125595398
bna-r.1
for
106360928
bna-r.1
for
106375372
cit-r.1
for
102617648
gma-u.5
for
100804455
gma-u.5
for
100793480
vvi-u.5
for
100252379
ppo-u.5
for
7456105
ppo-u.5
for
18094107
mtr-u.5
for
11415720
sly-u.5
for
101264976
sly-u.5
for
101245654
sot-r.1
for
102598387
sot-r.1
for
102599949
nta-r.1
for
107779673
nta-r.1
for
107822910
nta-r.1
for
107806446
osa-u.5
for
4332055
osa-u.5
for
4324031
zma-u.5
for
100285832
zma-u.5
for
100283395
tae-r.2
for
123046605
tae-r.2
for
123050695
tae-r.2
for
123126429
hvu-r.1
for
123427774
hvu-r.1
for
123436738
sbi-r.1
for
110431646
bdi-r.1
for
100841254
bdi-r.1
for
100833650
cre-r.1
for
CHLRE_17g734516v5


Ortholog ID: 4415
Species ghi ghi ghi ath ath bra bra bna bna bna cit gma gma vvi ppo ppo mtr sly sly sot sot nta nta nta osa osa zma zma tae tae tae hvu hvu sbi bdi bdi cre
Symbol LOC107919967 LOC107938579 LOC107930643 AT4G19006 AT5G45620 LOC103834095 LOC103827785 LOC125595398 LOC106386438 LOC106419761 LOC102617648 LOC100804455 LOC100793480 LOC100252379 LOC7456105 LOC18094107 LOC11415720 LOC101264976 LOC101245654 LOC102598387 LOC102599949 LOC107779673 LOC107822910 LOC107783713 LOC4332055 LOC4324031 LOC100285832 LOC100283395 LOC123126429 LOC123181497 LOC123054473 LOC123427774 LOC123436738 LOC110431646 LOC100841254 LOC100833650 CHLRE_17g734516v5
Function* 26S proteasome non-ATPase regulatory subunit 13 homolog B 26S proteasome non-ATPase regulatory subunit 13 homolog A 26S proteasome non-ATPase regulatory subunit 13 homolog B Proteasome component (PCI) domain protein Proteasome component (PCI) domain protein 26S proteasome non-ATPase regulatory subunit 13 homolog B 26S proteasome non-ATPase regulatory subunit 13 homolog A 26S proteasome non-ATPase regulatory subunit 13 homolog B-like 26S proteasome non-ATPase regulatory subunit 13 homolog A 26S proteasome non-ATPase regulatory subunit 13 homolog B 26S proteasome non-ATPase regulatory subunit 13 homolog B 26S proteasome non-ATPase regulatory subunit 13-like 26S proteasome non-ATPase regulatory subunit 13-like 26S proteasome non-ATPase regulatory subunit 13 homolog A 26S proteasome non-ATPase regulatory subunit 13 homolog A 26S proteasome non-ATPase regulatory subunit 13 homolog B 26S proteasome non-ATPase regulatory subunit 13 homolog B 26S proteasome non-ATPase regulatory subunit 13 homolog B 26S proteasome non-ATPase regulatory subunit 13 homolog B 26S proteasome non-ATPase regulatory subunit 13 homolog B 26S proteasome non-ATPase regulatory subunit 13 homolog B-like 26S proteasome non-ATPase regulatory subunit 13 homolog B 26S proteasome non-ATPase regulatory subunit 13 homolog B 26S proteasome non-ATPase regulatory subunit 13 homolog B 26S proteasome non-ATPase regulatory subunit 13 homolog B 26S proteasome non-ATPase regulatory subunit 13 homolog B 26S proteasome non-ATPase regulatory subunit 13 26S proteasome non-ATPase regulatory subunit 13 homolog A 26S proteasome non-ATPase regulatory subunit 13 homolog B 26S proteasome non-ATPase regulatory subunit 13 homolog B 26S proteasome non-ATPase regulatory subunit 13 homolog B 26S proteasome non-ATPase regulatory subunit 13 homolog B-like 26S proteasome non-ATPase regulatory subunit 13 homolog B-like 26S proteasome non-ATPase regulatory subunit 13 homolog B-like 26S proteasome non-ATPase regulatory subunit 13 homolog B 26S proteasome non-ATPase regulatory subunit 13 homolog B uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 4
ghi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 4
ghi04075 Plant hormone signal transduction 4
ghi04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 13
bna03060 Protein export 2
bna03022 Basal transcription factors 2
bna03420 Nucleotide excision repair 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 7
bna03022 Basal transcription factors 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 13
bna03060 Protein export 2
bna03022 Basal transcription factors 2
bna03420 Nucleotide excision repair 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 13
cit01200 Carbon metabolism 3
cit00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 10
gma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 6
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 10
vvi03082 ATP-dependent chromatin remodeling 2
vvi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 12
ppo00010 Glycolysis / Gluconeogenesis 2
ppo01200 Carbon metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 11
ppo04141 Protein processing in endoplasmic reticulum 4
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 5
sly00510 N-Glycan biosynthesis 4
sly00513 Various types of N-glycan biosynthesis 4
sly03050 Proteasome 4
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot03008 Ribosome biogenesis in eukaryotes 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 9
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 6
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 6
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 4
zma04130 SNARE interactions in vesicular transport 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 13
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 7
hvu00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 6
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 11
bdi03015 mRNA surveillance pathway 3
bdi04120 Ubiquitin mediated proteolysis 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 20
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107919967 107938579 107930643 827638 834602 103834095 103827785 125595398 106386438 106419761 102617648 100804455 100793480 100252379 7456105 18094107 11415720 101264976 101245654 102598387 102599949 107779673 107822910 107783713 4332055 4324031 100285832 100283395 123126429 123181497 123054473 123427774 123436738 110431646 100841254 100833650 5718622
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