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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107912227   transcription factor MYC2 
 ghi-r.1   107910351   transcription factor MYC2 
 ghi-r.1   107911642   transcription factor MYC2 
 ghi-r.1   107914915   transcription factor MYC2 
 ath-u.5   AT4G00870   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 bra-r.6   103839572   transcription factor bHLH28 
 bra-r.6   103839575   transcription factor MYC1 
 bna-r.1   106366842   transcription factor bHLH28-like 
 bna-r.1   106446150   transcription factor bHLH28-like 
 bna-r.1   106364449   transcription factor bHLH28 
 cit-r.1   107178701   transcription factor MYC2-like 
 cit-r.1   102607443   transcription factor MYC2-like 
 gma-u.5   100795733   transcription factor MYC2 
 gma-u.5   100804965   transcription factor MYC2 
 gma-u.5   100777730   transcription factor MYC1 
 vvi-u.5   100262545   transcription factor MYC2 
 ppo-u.5   7477819   transcription factor MYC1 
 ppo-u.5   7478791   transcription factor MYC2 
 mtr-u.5   25500640   transcription factor MYC1 
 mtr-u.5   25500639   transcription factor MYC2 
 sly-u.5   101267164   transcription factor bHLH14-like 
 sot-r.1   102603452   transcription factor bHLH14-like 
 sot-r.1   102603121   transcription factor MYC4-like 
 sot-r.1   102596840   transcription factor MYC4-like 
 nta-r.1   107825769   transcription factor MYC3 

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Top 50 coexpressed genes to 107912227 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107912227 (ghi-r.1 coexpression data)

CoexMap"107912227"


ghiLOC107912227 | Entrez gene ID : 107912227    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta bdi osa tae zma cre sbi hvu
Paralog 4 1 2 3 2 3 1 2 2 1 3 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04016 [list] [network] MAPK signaling pathway - plant (428 genes)
ghi04075 [list] [network] Plant hormone signal transduction (1215 genes)
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (1027 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (1206 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
Protein XP_016695799.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1,  cyto 1,  cysk 1  (predict for XP_016695799.1)
Subcellular
localization
TargetP
other 4,  scret 4  (predict for XP_016695799.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107912227
ghi-r.1
for
107910351
ghi-r.1
for
107911642
ghi-r.1
for
107914915
ath-u.5
for
AT4G00870
bra-r.6
for
103839572
bra-r.6
for
103839575
bna-r.1
for
106366842
bna-r.1
for
106446150
bna-r.1
for
106364449
cit-r.1
for
107178701
cit-r.1
for
102607443
gma-u.5
for
100795733
gma-u.5
for
100804965
gma-u.5
for
100777730
vvi-u.5
for
100262545
ppo-u.5
for
7477819
ppo-u.5
for
7478791
mtr-u.5
for
25500640
mtr-u.5
for
25500639
sly-u.5
for
101267164
sot-r.1
for
102603452
sot-r.1
for
102603121
sot-r.1
for
102596840
nta-r.1
for
107825769


Ortholog ID: 2922
Species ghi ghi ghi ath bra bra bna bna bna cit cit gma gma gma vvi ppo ppo mtr mtr sly sot sot sot nta
Symbol LOC107912227 LOC107956486 LOC121210908 AT4G00870 LOC103839572 LOC103839575 LOC106366842 LOC106446150 LOC106364449 LOC107178701 LOC102607443 LOC100795733 LOC100804965 LOC100777730 LOC100262545 LOC7477819 LOC7478791 LOC25500640 LOC25500639 LOC101264068 LOC102601277 LOC102590233 LOC102588761 LOC107761668
Function* transcription factor MYC2 transcription factor MYC2 transcription factor bHLH14 basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH28 transcription factor MYC1 transcription factor bHLH28-like transcription factor bHLH28-like transcription factor bHLH28 transcription factor MYC2-like transcription factor MYC2-like transcription factor MYC2 transcription factor MYC2 transcription factor MYC1 transcription factor MYC2 transcription factor MYC1 transcription factor MYC2 transcription factor MYC1 transcription factor MYC2 transcription factor bHLH14-like transcription factor bHLH14-like transcription factor MYC2-like transcription factor MYC2-like transcription factor bHLH14
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 3
ghi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 3
ghi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00430 Taurine and hypotaurine metabolism 2
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
ghi00270 Cysteine and methionine metabolism 2
ghi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 5
gma00900 Terpenoid backbone biosynthesis 2
gma00230 Purine metabolism 2
gma00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 12
ppo04016 MAPK signaling pathway - plant 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 7
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00010 Glycolysis / Gluconeogenesis 2
sly00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 7
sot04016 MAPK signaling pathway - plant 5
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00902 Monoterpenoid biosynthesis 2
sot00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04082 Neuroactive ligand signaling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107912227 107956486 121210908 827990 103839572 103839575 106366842 106446150 106364449 107178701 102607443 100795733 100804965 100777730 100262545 7477819 7478791 25500640 25500639 101264068 102601277 102590233 102588761 107761668
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