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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107912410   sm-like protein LSM2 
 ghi-r.1   107923601   heavy metal-associated isoprenylated plant protein 42 

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Top 50 coexpressed genes to 107912410 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107912410 (ghi-r.1 coexpression data)

CoexMap"107912410"


ghiLOC107912410 | Entrez gene ID : 107912410    
Species ghi vvi bdi bna ppo sbi gma cit hvu sot sly nta osa tae zma cre mtr ath bra
Paralog 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (384 genes)  IEA  
GO CC
GO:1990726 [list] [network] Lsm1-7-Pat1 complex  (21 genes)  IEA  
GO:0005688 [list] [network] U6 snRNP  (25 genes)  IEA  
GO:0046540 [list] [network] U4/U6 x U5 tri-snRNP complex  (61 genes)  IEA  
GO:0071011 [list] [network] precatalytic spliceosome  (86 genes)  IEA  
GO:0000932 [list] [network] P-body  (130 genes)  IEA  
GO:0071013 [list] [network] catalytic step 2 spliceosome  (137 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (4664 genes)  IEA  
Protein XP_016696068.1 [sequence] [blastp]
XP_016696069.1 [sequence] [blastp]
XP_040962005.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 3,  chlo 2,  nucl 2,  mito 1,  plas 1,  extr 1,  golg 1,  golg_plas 1,  mito_plas 1  (predict for XP_016696068.1)
cyto 6,  cyto_E.R. 4,  chlo 1,  nucl 1,  extr 1,  cysk 1,  cysk_nucl 1  (predict for XP_016696069.1)
cyto 6,  cyto_E.R. 4,  extr 1,  chlo 1,  cysk 1  (predict for XP_040962005.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016696068.1)
other 7,  scret 3  (predict for XP_016696069.1)
other 6,  scret 3  (predict for XP_040962005.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107912410
ghi-r.1
for
107923601


Ortholog ID: 27612
Species ghi ghi
Symbol LOC107912410 LOC107923601
Function* sm-like protein LSM2 heavy metal-associated isoprenylated plant protein 42
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
ghi03010 Ribosome 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
Expression Expression pattern Expression pattern
Entrez Gene ID* 107912410 107923601
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