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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107912989   transcription factor bHLH121 
 ghi-r.1   107908672   transcription factor bHLH121 
 ghi-r.1   107936546   transcription factor bHLH121 
 ghi-r.1   107927998   transcription factor bHLH121 
 ath-u.5   bHLH121   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 bra-r.6   103836899   transcription factor bHLH121 
 bna-r.1   106346338   transcription factor bHLH121-like 
 bna-r.1   106352967   transcription factor bHLH121 
 cit-r.1   102618080   transcription factor bHLH121 
 gma-u.5   100818281   transcription factor bHLH121 
 gma-u.5   100817000   transcription factor bHLH121-like 
 gma-u.5   100804250   transcription factor bHLH121 
 vvi-u.5   100853249   transcription factor bHLH121-like 
 vvi-u.5   100257183   transcription factor bHLH121 
 vvi-u.5   100259173   transcription factor bHLH121 
 ppo-u.5   18099189   transcription factor bHLH121 
 ppo-u.5   7453632   transcription factor bHLH121 
 ppo-u.5   7472151   transcription factor bHLH121 
 mtr-u.5   25482561   transcription factor bHLH121 
 mtr-u.5   25492845   transcription factor bHLH121 
 sly-u.5   101258704   transcription factor bHLH121 
 sot-r.1   102583791   transcription factor bHLH121 
 nta-r.1   107822297   transcription factor bHLH121 
 nta-r.1   107794568   transcription factor bHLH121 
 nta-r.1   107769722   transcription factor bHLH121-like 
 osa-u.5   4329217   transcription factor bHLH121 
 zma-u.5   100286079   uncharacterized LOC100286079 
 tae-r.2   123139195   transcription factor bHLH121 
 tae-r.2   123127541   transcription factor bHLH121 
 sbi-r.1   8054388   transcription factor bHLH121 
 bdi-r.1   100833498   transcription factor bHLH121 

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Top 50 coexpressed genes to 107912989 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107912989 (ghi-r.1 coexpression data)

CoexMap"107912989"


ghiLOC107912989 | Entrez gene ID : 107912989    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae sbi bdi hvu cre
Paralog 4 1 1 2 1 3 3 3 2 1 1 3 1 1 2 1 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006879 [list] [network] intracellular iron ion homeostasis  (38 genes)  IEA  
GO CC
GO MF
GO:0046983 [list] [network] protein dimerization activity  (1206 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
Protein XP_016696875.2 [sequence] [blastp]
XP_040937362.1 [sequence] [blastp]
XP_040937363.1 [sequence] [blastp]
XP_040937364.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1  (predict for XP_016696875.2)
nucl 8,  chlo 1  (predict for XP_040937362.1)
nucl 4,  mito 3,  chlo 1,  cyto_mito 1  (predict for XP_040937363.1)
mito 5,  nucl 4,  chlo 1  (predict for XP_040937364.1)
Subcellular
localization
TargetP
other 5  (predict for XP_016696875.2)
other 5  (predict for XP_040937362.1)
other 7  (predict for XP_040937363.1)
other 7  (predict for XP_040937364.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107912989
ghi-r.1
for
107908672
ghi-r.1
for
107936546
ghi-r.1
for
107927998
ath-u.5
for
bHLH121
bra-r.6
for
103836899
bna-r.1
for
106346338
bna-r.1
for
106352967
cit-r.1
for
102618080
gma-u.5
for
100818281
gma-u.5
for
100817000
gma-u.5
for
100804250
vvi-u.5
for
100853249
vvi-u.5
for
100257183
vvi-u.5
for
100259173
ppo-u.5
for
18099189
ppo-u.5
for
7453632
ppo-u.5
for
7472151
mtr-u.5
for
25482561
mtr-u.5
for
25492845
sly-u.5
for
101258704
sot-r.1
for
102583791
nta-r.1
for
107822297
nta-r.1
for
107794568
nta-r.1
for
107769722
osa-u.5
for
4329217
zma-u.5
for
100286079
tae-r.2
for
123139195
tae-r.2
for
123127541
sbi-r.1
for
8054388
bdi-r.1
for
100833498


Ortholog ID: 5523
Species ghi ghi ghi ath bra bna bna cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr sly sot nta nta nta osa zma tae tae sbi bdi
Symbol LOC107912989 LOC107908672 LOC107936546 bHLH121 LOC103836899 LOC106346338 LOC106352967 LOC102618080 LOC100818281 LOC100817000 LOC100796801 LOC100853249 LOC100257183 LOC100259173 LOC18099189 LOC7453632 LOC7472151 LOC25482561 LOC25492845 LOC101258704 LOC102583791 LOC107822297 LOC107794568 LOC107769722 LOC4329217 LOC100286079 LOC123139195 LOC123127541 LOC8054388 LOC100833498
Function* transcription factor bHLH121 transcription factor bHLH121 transcription factor bHLH121 basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH121 transcription factor bHLH121-like transcription factor bHLH121 transcription factor bHLH121 transcription factor bHLH121 transcription factor bHLH121-like transcription factor bHLH121 transcription factor bHLH121-like transcription factor bHLH121 transcription factor bHLH121 transcription factor bHLH121 transcription factor bHLH121 transcription factor bHLH121 transcription factor bHLH121 transcription factor bHLH121 transcription factor bHLH121 transcription factor bHLH121 transcription factor bHLH121 transcription factor bHLH121 transcription factor bHLH121-like transcription factor bHLH121 uncharacterized LOC100286079 transcription factor bHLH121 transcription factor bHLH121 transcription factor bHLH121 transcription factor bHLH121
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 10
gma00190 Oxidative phosphorylation 4
gma00020 Citrate cycle (TCA cycle) 3
gma01200 Carbon metabolism 3
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 7
gma04145 Phagosome 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 4
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00051 Fructose and mannose metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00564 Glycerophospholipid metabolism 3
sbi00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 2
bdi01200 Carbon metabolism 2
bdi01230 Biosynthesis of amino acids 2
bdi04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107912989 107908672 107936546 821523 103836899 106346338 106352967 102618080 100818281 100817000 100796801 100853249 100257183 100259173 18099189 7453632 7472151 25482561 25492845 101258704 102583791 107822297 107794568 107769722 4329217 100286079 123139195 123127541 8054388 100833498
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