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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107913577   phytochrome A-associated F-box protein 
 ghi-r.1   107946079   phytochrome A-associated F-box protein-like 
 ghi-r.1   107927789   phytochrome A-associated F-box protein 
 ghi-r.1   107931245   phytochrome A-associated F-box protein 
 ath-u.5   EID1   F-box family protein 
 bra-r.6   103836747   phytochrome A-associated F-box protein 
 bna-r.1   106439339   phytochrome A-associated F-box protein 
 bna-r.1   111210914   phytochrome A-associated F-box protein-like 
 cit-r.1   102626209   phytochrome A-associated F-box protein 
 gma-u.5   100798457   phytochrome A-associated F-box protein 
 gma-u.5   100789324   phytochrome A-associated F-box protein 
 vvi-u.5   100250321   phytochrome A-associated F-box protein 
 ppo-u.5   7491305   phytochrome A-associated F-box protein 
 ppo-u.5   7478839   phytochrome A-associated F-box protein 
 mtr-u.5   11435282   phytochrome A-associated F-box protein 
 sly-u.5   101247753   phytochrome A-associated F-box protein 
 sot-r.1   102593525   phytochrome A-associated F-box protein 
 nta-r.1   107823072   phytochrome A-associated F-box protein 
 nta-r.1   107790817   phytochrome A-associated F-box protein 
 osa-u.5   9272149   phytochrome A-associated F-box protein 
 zma-u.5   100276883   uncharacterized LOC100276883 
 tae-r.2   123181781   phytochrome A-associated F-box protein-like 
 tae-r.2   123129668   phytochrome A-associated F-box protein 
 tae-r.2   123053188   phytochrome A-associated F-box protein 
 hvu-r.1   123412183   phytochrome A-associated F-box protein 
 sbi-r.1   8062696   phytochrome A-associated F-box protein 
 bdi-r.1   106866213   phytochrome A-associated F-box protein 

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Top 50 coexpressed genes to 107913577 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107913577 (ghi-r.1 coexpression data)

CoexMap"107913577"


ghiLOC107913577 | Entrez gene ID : 107913577    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 2 1 2 1 2 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016697702.1 [sequence] [blastp]
XP_016697708.1 [sequence] [blastp]
XP_040955808.1 [sequence] [blastp]
XP_040955809.1 [sequence] [blastp]
XP_040955810.1 [sequence] [blastp]
XP_040955811.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_016697702.1)
nucl 9  (predict for XP_016697708.1)
nucl 9  (predict for XP_040955808.1)
nucl 7,  chlo 2  (predict for XP_040955809.1)
nucl 7,  chlo 2  (predict for XP_040955810.1)
nucl 7,  chlo 2  (predict for XP_040955811.1)
Subcellular
localization
TargetP
other 6  (predict for XP_016697702.1)
other 6  (predict for XP_016697708.1)
other 6  (predict for XP_040955808.1)
other 5  (predict for XP_040955809.1)
other 5  (predict for XP_040955810.1)
other 5  (predict for XP_040955811.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107913577
ghi-r.1
for
107946079
ghi-r.1
for
107927789
ghi-r.1
for
107931245
ath-u.5
for
EID1
bra-r.6
for
103836747
bna-r.1
for
106439339
bna-r.1
for
111210914
cit-r.1
for
102626209
gma-u.5
for
100798457
gma-u.5
for
100789324
vvi-u.5
for
100250321
ppo-u.5
for
7491305
ppo-u.5
for
7478839
mtr-u.5
for
11435282
sly-u.5
for
101247753
sot-r.1
for
102593525
nta-r.1
for
107823072
nta-r.1
for
107790817
osa-u.5
for
9272149
zma-u.5
for
100276883
tae-r.2
for
123181781
tae-r.2
for
123129668
tae-r.2
for
123053188
hvu-r.1
for
123412183
sbi-r.1
for
8062696
bdi-r.1
for
106866213


Ortholog ID: 9034
Species ghi ghi ghi ath bra bna bna cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107913577 LOC107946079 LOC107931245 EID1 LOC103836747 LOC106439339 LOC111210914 LOC102626209 LOC100798457 LOC100789324 LOC100250321 LOC7491305 LOC7478839 LOC11435282 LOC101247753 LOC102593525 LOC107823072 LOC107790817 LOC9272149 LOC100276883 LOC123181781 LOC123129668 LOC123053188 LOC123412183 LOC8062696 LOC106866213
Function* phytochrome A-associated F-box protein phytochrome A-associated F-box protein-like phytochrome A-associated F-box protein F-box family protein phytochrome A-associated F-box protein phytochrome A-associated F-box protein phytochrome A-associated F-box protein-like phytochrome A-associated F-box protein phytochrome A-associated F-box protein phytochrome A-associated F-box protein phytochrome A-associated F-box protein phytochrome A-associated F-box protein phytochrome A-associated F-box protein phytochrome A-associated F-box protein phytochrome A-associated F-box protein phytochrome A-associated F-box protein phytochrome A-associated F-box protein phytochrome A-associated F-box protein phytochrome A-associated F-box protein uncharacterized LOC100276883 phytochrome A-associated F-box protein-like phytochrome A-associated F-box protein phytochrome A-associated F-box protein phytochrome A-associated F-box protein phytochrome A-associated F-box protein phytochrome A-associated F-box protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03083 Polycomb repressive complex 2
ath04120 Ubiquitin mediated proteolysis 2
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 2
bna04142 Lysosome 2
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 2
bna04142 Lysosome 2
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00051 Fructose and mannose metabolism 2
tae00710 Carbon fixation by Calvin cycle 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 2
sbi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00908 Zeatin biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107913577 107946079 107931245 828008 103836747 106439339 111210914 102626209 100798457 100789324 100250321 7491305 7478839 11435282 101247753 102593525 107823072 107790817 9272149 100276883 123181781 123129668 123053188 123412183 8062696 106866213
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