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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107913888   polyadenylate-binding protein 6 
 ghi-r.1   107895718   polyadenylate-binding protein 6 
 bna-r.1   106452213   polyadenylate-binding protein 6 
 bna-r.1   106454018   polyadenylate-binding protein 6-like 

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Top 50 coexpressed genes to 107913888 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107913888 (ghi-r.1 coexpression data)

CoexMap"107913888"


ghiLOC107913888 | Entrez gene ID : 107913888    
Species ghi bna vvi bdi ppo sbi gma cit hvu sot sly nta osa tae zma cre mtr ath bra
Paralog 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03015 [list] [network] mRNA surveillance pathway (365 genes)
ghi03018 [list] [network] RNA degradation (286 genes)
GO BP
GO CC
GO:1990904 [list] [network] ribonucleoprotein complex  (1534 genes)  IEA  
GO:0005829 [list] [network] cytosol  (2580 genes)  IEA  
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0008266 [list] [network] poly(U) RNA binding  (22 genes)  IEA  
GO:0008143 [list] [network] poly(A) binding  (38 genes)  IEA  
GO:0003730 [list] [network] mRNA 3'-UTR binding  (46 genes)  IEA  
Protein XP_016698046.2 [sequence] [blastp]
XP_040958911.1 [sequence] [blastp]
XP_040958912.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  cyto 1,  pero 1,  cysk_nucl 1,  nucl_plas 1,  cyto_pero 1  (predict for XP_016698046.2)
chlo 7,  nucl 1,  cyto 1,  pero 1,  cysk_nucl 1,  nucl_plas 1,  cyto_pero 1  (predict for XP_040958911.1)
chlo 5,  nucl 2,  cyto 1,  extr 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_040958912.1)
Subcellular
localization
TargetP
other 4,  chlo 3  (predict for XP_016698046.2)
other 4,  chlo 3  (predict for XP_040958911.1)
other 4,  chlo 3  (predict for XP_040958912.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107913888
ghi-r.1
for
107895718
bna-r.1
for
106452213
bna-r.1
for
106454018


Ortholog ID: 15826
Species ghi ghi bna bna
Symbol LOC107913888 LOC107895718 LOC106452213 LOC106454018
Function* polyadenylate-binding protein 6 polyadenylate-binding protein 6 polyadenylate-binding protein 6 polyadenylate-binding protein 6-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi03018 RNA degradation 2
ghi00061 Fatty acid biosynthesis 2
ghi00071 Fatty acid degradation 2
ghi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi03018 RNA degradation 2
ghi00061 Fatty acid biosynthesis 2
ghi00071 Fatty acid degradation 2
ghi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
bna03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107913888 107895718 106452213 106454018
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