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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107913989   pentatricopeptide repeat-containing protein At5g18390, mitochondrial 
 ath-u.5   AT5G18390   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100797263   pentatricopeptide repeat-containing protein At5g18390, mitochondrial 
 vvi-u.5   100260382   pentatricopeptide repeat-containing protein At5g18390, mitochondrial 
 ppo-u.5   7469828   pentatricopeptide repeat-containing protein At5g18390, mitochondrial 
 mtr-u.5   25493276   pentatricopeptide repeat-containing protein At5g18390, mitochondrial 
 sly-u.5   101243933   pentatricopeptide repeat-containing protein 
 osa-u.5   4346089   pentatricopeptide repeat-containing protein At5g18390, mitochondrial 
 zma-u.5   100304439   Pentatricopeptide repeat-containing protein mitochondrial 

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Top 50 coexpressed genes to 107913989 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107913989 (ghi-r.1 coexpression data)

CoexMap"107913989"


ghiLOC107913989 | Entrez gene ID : 107913989    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0008380 [list] [network] RNA splicing  (454 genes)  IEA  
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_040969570.1 [sequence] [blastp]
XP_040969571.1 [sequence] [blastp]
XP_040969572.1 [sequence] [blastp]
XP_040969573.1 [sequence] [blastp]
XP_040969574.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  chlo_mito 4,  mito 4,  cyto_mito 2  (predict for XP_040969570.1)
chlo 5,  chlo_mito 4,  mito 4,  cyto_mito 2  (predict for XP_040969571.1)
chlo 5,  chlo_mito 4,  mito 4,  cyto_mito 2  (predict for XP_040969572.1)
chlo 5,  chlo_mito 4,  mito 4,  cyto_mito 2  (predict for XP_040969573.1)
chlo 5,  chlo_mito 4,  mito 4,  cyto_mito 2  (predict for XP_040969574.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_040969570.1)
mito 9  (predict for XP_040969571.1)
mito 9  (predict for XP_040969572.1)
mito 9  (predict for XP_040969573.1)
mito 9  (predict for XP_040969574.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107913989
ath-u.5
for
AT5G18390
gma-u.5
for
100797263
vvi-u.5
for
100260382
ppo-u.5
for
7469828
mtr-u.5
for
25493276
sly-u.5
for
101243933
osa-u.5
for
4346089
zma-u.5
for
100304439


Ortholog ID: 10310
Species ghi ghi ath bra bna bna gma vvi ppo mtr sly sot osa zma tae tae hvu sbi bdi
Symbol LOC107896323 LOC107913989 AT5G18390 LOC103856303 LOC106433830 LOC106386572 LOC100797263 LOC100260382 LOC7469828 LOC25493276 LOC101243933 LOC102598212 LOC4346089 LOC100304439 LOC123151617 LOC123155815 LOC123406999 LOC8062412 LOC100837193
Function* pentatricopeptide repeat-containing protein At5g18390, mitochondrial pentatricopeptide repeat-containing protein At5g18390, mitochondrial Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g18390, mitochondrial pentatricopeptide repeat-containing protein At5g18390, mitochondrial pentatricopeptide repeat-containing protein At5g18390, mitochondrial pentatricopeptide repeat-containing protein At5g18390, mitochondrial pentatricopeptide repeat-containing protein At5g18390, mitochondrial pentatricopeptide repeat-containing protein At5g18390, mitochondrial pentatricopeptide repeat-containing protein At5g18390, mitochondrial pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g18390, mitochondrial pentatricopeptide repeat-containing protein At5g18390, mitochondrial Pentatricopeptide repeat-containing protein mitochondrial pentatricopeptide repeat-containing protein At5g18390, mitochondrial pentatricopeptide repeat-containing protein At5g18390, mitochondrial pentatricopeptide repeat-containing protein At5g18390, mitochondrial pentatricopeptide repeat-containing protein At5g18390, mitochondrial pentatricopeptide repeat-containing protein At5g18390, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03015 mRNA surveillance pathway 2
bna03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
bdi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107896323 107913989 831957 103856303 106433830 106386572 100797263 100260382 7469828 25493276 101243933 102598212 4346089 100304439 123151617 123155815 123406999 8062412 100837193
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