ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107914395	uncharacterized LOC107914395
ghi-r.1	121222274	uncharacterized LOC121222274
ath-u.5	AT5G10320	ATP synthase subunit B
ath-u.5	AT4G13577	uncharacterized protein
bra-r.6	103846817	uncharacterized LOC103846817
bna-r.1	BNAC09G46320D	uncharacterized BNAC09G46320D
cit-r.1	102619742	uncharacterized LOC102619742
gma-u.5	100790010	uncharacterized LOC100790010
gma-u.5	100785618	uncharacterized LOC100785618
vvi-u.5	100853304	uncharacterized LOC100853304
ppo-u.5	7479186	uncharacterized LOC7479186
mtr-u.5	11415013	uncharacterized LOC11415013
sly-u.5	101259307	uncharacterized LOC101259307
sot-r.1	102593154	uncharacterized LOC102593154
nta-r.1	107810590	uncharacterized LOC107810590
nta-r.1	107810361	uncharacterized LOC107810361
osa-u.5	4336003	uncharacterized LOC4336003
zma-u.5	100277765	uncharacterized LOC100277765
tae-r.2	123045623	uncharacterized LOC123045623
tae-r.2	123053466	uncharacterized LOC123053466
hvu-r.1	123426875	uncharacterized LOC123426875
sbi-r.1	8057448	uncharacterized LOC8057448
bdi-r.1	100837836	uncharacterized LOC100837836
cre-r.1	CHLRE_17g719050v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0006355 [list] [network] regulation of DNA-templated transcription

(4318 genes)

IEA

GO CC

GO MF

GO:0003700 [list] [network] DNA-binding transcription factor activity	(3140 genes)	IEA
GO:0003677 [list] [network] DNA binding	(4831 genes)	IEA

Protein

XP_040934717.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, nucl 4

(predict for XP_040934717.1)

Subcellular
localization
TargetP

other 7

(predict for XP_040934717.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107914395	ghi-r.1 for 121222274	ath-u.5 for AT5G10320	ath-u.5 for AT4G13577	bra-r.6 for 103846817	bna-r.1 for BNAC09G46320D	cit-r.1 for 102619742	gma-u.5 for 100790010	gma-u.5 for 100785618	vvi-u.5 for 100853304	ppo-u.5 for 7479186	mtr-u.5 for 11415013	sly-u.5 for 101259307	sot-r.1 for 102593154	nta-r.1 for 107810590	nta-r.1 for 107810361	osa-u.5 for 4336003	zma-u.5 for 100277765	tae-r.2 for 123045623	tae-r.2 for 123053466	hvu-r.1 for 123426875	sbi-r.1 for 8057448	bdi-r.1 for 100837836	cre-r.1 for CHLRE_17g719050v5

Ortholog

Ortholog ID: 9646

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC107914395

uncharacterized LOC121222274

ATP synthase subunit B

uncharacterized protein

uncharacterized LOC103846817

uncharacterized BNAC09G46320D

uncharacterized LOC102619742

uncharacterized LOC100790010

uncharacterized LOC100785618

uncharacterized LOC100853304

uncharacterized LOC7479186

uncharacterized LOC11415013

uncharacterized LOC101259307

uncharacterized LOC102593154

uncharacterized LOC107810590

uncharacterized LOC107810361

uncharacterized LOC4336003

uncharacterized LOC100277765

uncharacterized LOC123045623

uncharacterized LOC123053466

uncharacterized LOC123426875

uncharacterized LOC8057448

uncharacterized LOC100837836

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00220	Arginine biosynthesis	2
ghi00250	Alanine, aspartate and glutamate metabolism	2
ghi00270	Cysteine and methionine metabolism	2
ghi00330	Arginine and proline metabolism	2
ghi00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03020	RNA polymerase	4
bna03420	Nucleotide excision repair	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03460	Fanconi anemia pathway	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	4
vvi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	3
sot03020	RNA polymerase	2
sot04120	Ubiquitin mediated proteolysis	2
sot03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00240	Pyrimidine metabolism	2
nta01232	Nucleotide metabolism	2
nta03022	Basal transcription factors	2
nta03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	2
nta03022	Basal transcription factors	2
nta03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01230	Biosynthesis of amino acids	2
cre01200	Carbon metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

107914395

121222274

830896

28720126

103846817

106402841

102619742

100790010

100785618

100853304

7479186

11415013

101259307

102593154

107810590

107810361

4336003

100277765

123045623

123053466

123426875

8057448

100837836

5729317

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107914395 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107914395 (ghi-r.1 coexpression data)


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	2	1	1	1	2	1	1	1	1	1	2	1	1	2	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107914395 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107914395 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**