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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107914923   photosynthetic NDH subunit of subcomplex B 3, chloroplastic 
 ghi-r.1   107897495   photosynthetic NDH subunit of subcomplex B 3, chloroplastic 
 ath-u.5   PnsB3   NDH-dependent cyclic electron flow 1 
 bra-r.6   103869841   photosynthetic NDH subunit of subcomplex B 3, chloroplastic 
 bra-r.6   103840092   photosynthetic NDH subunit of subcomplex B 3, chloroplastic 
 bna-r.1   106452221   photosynthetic NDH subunit of subcomplex B 3, chloroplastic 
 bna-r.1   106401011   photosynthetic NDH subunit of subcomplex B 3, chloroplastic 
 bna-r.1   125577452   photosynthetic NDH subunit of subcomplex B 3, chloroplastic-like 
 cit-r.1   102626236   photosynthetic NDH subunit of subcomplex B 3, chloroplastic 
 gma-u.5   100500287   photosynthetic NDH subunit of subcomplex B 
 gma-u.5   100820264   photosynthetic NDH subunit of subcomplex B 3, chloroplastic 
 vvi-u.5   100241139   photosynthetic NDH subunit of subcomplex B 3, chloroplastic 
 ppo-u.5   7470571   photosynthetic NDH subunit of subcomplex B 3, chloroplastic 
 mtr-u.5   11429907   photosynthetic NDH subunit of subcomplex B 3, chloroplastic 
 sly-u.5   101258885   photosynthetic NDH subunit of subcomplex B 3, chloroplastic 
 sot-r.1   102582039   photosynthetic NDH subunit of subcomplex B 3, chloroplastic 
 nta-r.1   107817402   photosynthetic NDH subunit of subcomplex B 3, chloroplastic-like 
 nta-r.1   107815550   photosynthetic NDH subunit of subcomplex B 3, chloroplastic 
 osa-u.5   4343262   photosynthetic NDH subunit of subcomplex B 3, chloroplastic 
 zma-u.5   100273459   electron carrier/ electron transporter/ iron ion binding protein 
 tae-r.2   123161036   photosynthetic NDH subunit of subcomplex B 3, chloroplastic 
 tae-r.2   123152998   photosynthetic NDH subunit of subcomplex B 3, chloroplastic 
 tae-r.2   123169026   photosynthetic NDH subunit of subcomplex B 3, chloroplastic 
 hvu-r.1   123408649   photosynthetic NDH subunit of subcomplex B 3, chloroplastic 
 sbi-r.1   8080694   photosynthetic NDH subunit of subcomplex B 3, chloroplastic 
 bdi-r.1   100845974   photosynthetic NDH subunit of subcomplex B 3, chloroplastic 

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Top 50 coexpressed genes to 107914923 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107914923 (ghi-r.1 coexpression data)

CoexMap"107914923"


ghiLOC107914923 | Entrez gene ID : 107914923    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 2 3 1 2 1 1 1 1 1 2 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0140647 [list] [network] P450-containing electron transport chain  (13 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (283 genes)  IEA  
GO MF
GO:0051537 [list] [network] 2 iron, 2 sulfur cluster binding  (94 genes)  IEA  
Protein XP_016699476.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_016699476.1)
Subcellular
localization
TargetP
chlo 8,  mito 4  (predict for XP_016699476.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107914923
ghi-r.1
for
107897495
ath-u.5
for
PnsB3
bra-r.6
for
103869841
bra-r.6
for
103840092
bna-r.1
for
106452221
bna-r.1
for
106401011
bna-r.1
for
125577452
cit-r.1
for
102626236
gma-u.5
for
100500287
gma-u.5
for
100820264
vvi-u.5
for
100241139
ppo-u.5
for
7470571
mtr-u.5
for
11429907
sly-u.5
for
101258885
sot-r.1
for
102582039
nta-r.1
for
107817402
nta-r.1
for
107815550
osa-u.5
for
4343262
zma-u.5
for
100273459
tae-r.2
for
123161036
tae-r.2
for
123152998
tae-r.2
for
123169026
hvu-r.1
for
123408649
sbi-r.1
for
8080694
bdi-r.1
for
100845974


Ortholog ID: 8941
Species ghi ghi ath bra bra bna bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107914923 LOC107897495 PnsB3 LOC103869841 LOC103840092 LOC106452221 LOC106401011 LOC125577452 LOC102626236 LOC100500287 LOC100820264 LOC100241139 LOC7470571 LOC11429907 LOC101258885 LOC102582039 LOC107817402 LOC107815550 LOC4343262 LOC100273459 LOC123161036 LOC123152998 LOC123169026 LOC123408649 LOC8080694 LOC100845974
Function* photosynthetic NDH subunit of subcomplex B 3, chloroplastic photosynthetic NDH subunit of subcomplex B 3, chloroplastic NDH-dependent cyclic electron flow 1 photosynthetic NDH subunit of subcomplex B 3, chloroplastic photosynthetic NDH subunit of subcomplex B 3, chloroplastic photosynthetic NDH subunit of subcomplex B 3, chloroplastic photosynthetic NDH subunit of subcomplex B 3, chloroplastic photosynthetic NDH subunit of subcomplex B 3, chloroplastic-like photosynthetic NDH subunit of subcomplex B 3, chloroplastic photosynthetic NDH subunit of subcomplex B photosynthetic NDH subunit of subcomplex B 3, chloroplastic photosynthetic NDH subunit of subcomplex B 3, chloroplastic photosynthetic NDH subunit of subcomplex B 3, chloroplastic photosynthetic NDH subunit of subcomplex B 3, chloroplastic photosynthetic NDH subunit of subcomplex B 3, chloroplastic photosynthetic NDH subunit of subcomplex B 3, chloroplastic photosynthetic NDH subunit of subcomplex B 3, chloroplastic-like photosynthetic NDH subunit of subcomplex B 3, chloroplastic photosynthetic NDH subunit of subcomplex B 3, chloroplastic electron carrier/ electron transporter/ iron ion binding protein photosynthetic NDH subunit of subcomplex B 3, chloroplastic photosynthetic NDH subunit of subcomplex B 3, chloroplastic photosynthetic NDH subunit of subcomplex B 3, chloroplastic photosynthetic NDH subunit of subcomplex B 3, chloroplastic photosynthetic NDH subunit of subcomplex B 3, chloroplastic photosynthetic NDH subunit of subcomplex B 3, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00630 Glyoxylate and dicarboxylate metabolism 5
ghi01200 Carbon metabolism 5
ghi00710 Carbon fixation by Calvin cycle 3
ghi00860 Porphyrin metabolism 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00630 Glyoxylate and dicarboxylate metabolism 5
ghi01200 Carbon metabolism 5
ghi00710 Carbon fixation by Calvin cycle 3
ghi00195 Photosynthesis 2
ghi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 3
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 7
bna00630 Glyoxylate and dicarboxylate metabolism 7
bna00670 One carbon pool by folate 7
bna00785 Lipoic acid metabolism 7
bna01200 Carbon metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00630 Glyoxylate and dicarboxylate metabolism 9
bna01200 Carbon metabolism 9
bna00260 Glycine, serine and threonine metabolism 7
bna00670 One carbon pool by folate 7
bna00785 Lipoic acid metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 7
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo00710 Carbon fixation by Calvin cycle 3
ppo01200 Carbon metabolism 3
ppo00860 Porphyrin metabolism 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 6
nta00260 Glycine, serine and threonine metabolism 4
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta00670 One carbon pool by folate 4
nta00785 Lipoic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00730 Thiamine metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 8
tae00630 Glyoxylate and dicarboxylate metabolism 6
tae00710 Carbon fixation by Calvin cycle 4
tae00260 Glycine, serine and threonine metabolism 3
tae00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 2
hvu00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 7
bdi01200 Carbon metabolism 7
bdi00710 Carbon fixation by Calvin cycle 5
bdi00910 Nitrogen metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107914923 107897495 820871 103869841 103840092 106452221 106401011 125577452 102626236 100500287 100820264 100241139 7470571 11429907 101258885 102582039 107817402 107815550 4343262 100273459 123161036 123152998 123169026 123408649 8080694 100845974
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