ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107915252	probable hexosyltransferase MUCI70
ghi-r.1	107891783	probable hexosyltransferase MUCI70
ghi-r.1	107889005	probable hexosyltransferase MUCI70
ghi-r.1	107895272	probable hexosyltransferase MUCI70
ath-u.5	AT1G28240	strawberry notch protein (DUF616)
ath-u.5	AT1G53040	tRNA (met) cytidine acetyltransferase, putative (DUF616)
bra-r.6	103871160	uncharacterized LOC103871160
bra-r.6	103865296	uncharacterized LOC103865296
bra-r.6	103835341	uncharacterized LOC103835341
bna-r.1	BNAC07G10610D	probable hexosyltransferase MUCI70
bna-r.1	BNAC03G78100D	probable hexosyltransferase MUCI70
bna-r.1	106345911	probable hexosyltransferase MUCI70
cit-r.1	102625940	probable hexosyltransferase MUCI70
cit-r.1	102625961	probable hexosyltransferase MUCI70
gma-u.5	100810918	probable hexosyltransferase MUCI70
gma-u.5	100804922	probable hexosyltransferase MUCI70
gma-u.5	100792761	probable hexosyltransferase MUCI70
vvi-u.5	100246918	probable hexosyltransferase MUCI70
vvi-u.5	100256311	probable hexosyltransferase MUCI70
ppo-u.5	18103028	probable hexosyltransferase MUCI70
ppo-u.5	18095581	probable hexosyltransferase MUCI70
ppo-u.5	7477403	probable hexosyltransferase MUCI70
mtr-u.5	11441256	probable hexosyltransferase MUCI70
mtr-u.5	25493158	probable hexosyltransferase MUCI70
mtr-u.5	11413571	probable hexosyltransferase MUCI70
sly-u.5	101254615	probable hexosyltransferase MUCI70
sly-u.5	101247562	probable hexosyltransferase MUCI70
sot-r.1	102589017	uncharacterized LOC102589017
sot-r.1	102601452	uncharacterized LOC102601452
sot-r.1	102582809	uncharacterized LOC102582809
nta-r.1	107820391	putative hexosyltransferase MUCI70
nta-r.1	107771955	putative hexosyltransferase MUCI70
nta-r.1	107773981	putative hexosyltransferase MUCI70
osa-u.5	4323906	probable hexosyltransferase MUCI70
osa-u.5	4339416	probable hexosyltransferase MUCI70
zma-u.5	103635859	Inner membrane protein oxaA
zma-u.5	103635853	Inner membrane protein oxaA
tae-r.2	123182754	probable hexosyltransferase MUCI70
tae-r.2	123063411	probable hexosyltransferase MUCI70
tae-r.2	123064611	probable hexosyltransferase MUCI70
hvu-r.1	123447017	probable hexosyltransferase MUCI70
hvu-r.1	123448670	probable hexosyltransferase MUCI70
sbi-r.1	8067528	uncharacterized LOC8067528
sbi-r.1	8085901	uncharacterized LOC8085901
bdi-r.1	100838689	uncharacterized LOC100838689
bdi-r.1	100826851	uncharacterized LOC100826851

Top 50 coexpressed genes to 107915252 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107915252 (ghi-r.1 coexpression data)

CoexMap"107915252"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016699902.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 3, nucl 2, cyto_plas 2, chlo 1, plas 1, cyto_pero 1

(predict for XP_016699902.2)

Subcellular
localization
TargetP

other 7

(predict for XP_016699902.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107915252	ghi-r.1 for 107891783	ghi-r.1 for 107889005	ghi-r.1 for 107895272	ath-u.5 for AT1G28240	ath-u.5 for AT1G53040	bra-r.6 for 103871160	bra-r.6 for 103865296	bra-r.6 for 103835341	bna-r.1 for BNAC07G10610D	bna-r.1 for BNAC03G78100D	bna-r.1 for 106345911	cit-r.1 for 102625940	cit-r.1 for 102625961	gma-u.5 for 100810918	gma-u.5 for 100804922	gma-u.5 for 100792761	vvi-u.5 for 100246918	vvi-u.5 for 100256311	ppo-u.5 for 18103028	ppo-u.5 for 18095581	ppo-u.5 for 7477403	mtr-u.5 for 11441256	mtr-u.5 for 25493158	mtr-u.5 for 11413571	sly-u.5 for 101254615	sly-u.5 for 101247562	sot-r.1 for 102589017	sot-r.1 for 102601452	sot-r.1 for 102582809	nta-r.1 for 107820391	nta-r.1 for 107771955	nta-r.1 for 107773981	osa-u.5 for 4323906	osa-u.5 for 4339416	zma-u.5 for 103635859	zma-u.5 for 103635853	tae-r.2 for 123182754	tae-r.2 for 123063411	tae-r.2 for 123064611	hvu-r.1 for 123447017	hvu-r.1 for 123448670	sbi-r.1 for 8067528	sbi-r.1 for 8085901	bdi-r.1 for 100838689	bdi-r.1 for 100826851

Ortholog

Ortholog ID: 1406

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

probable hexosyltransferase MUCI70

strawberry notch protein (DUF616)

tRNA (met) cytidine acetyltransferase, putative (DUF616)

uncharacterized LOC103871160

uncharacterized LOC103829026

uncharacterized LOC103832699

probable hexosyltransferase MUCI70

uncharacterized LOC102589017

uncharacterized LOC102582809

uncharacterized LOC102590306

putative hexosyltransferase MUCI70

probable hexosyltransferase MUCI70

uncharacterized LOC103630624

uncharacterized LOC100382081

probable hexosyltransferase MUCI70

uncharacterized LOC8067528

uncharacterized LOC8085901

uncharacterized LOC100838689

uncharacterized LOC100826851

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi02010	ABC transporters	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00541	Biosynthesis of various nucleotide sugars	2
ghi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00520	Amino sugar and nucleotide sugar metabolism	2
ath03015	mRNA surveillance pathway	2
ath00230	Purine metabolism	2
ath00240	Pyrimidine metabolism	2
ath01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04148	Efferocytosis	3
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	5
bra01230	Biosynthesis of amino acids	4
bra00260	Glycine, serine and threonine metabolism	3
bra01240	Biosynthesis of cofactors	3
bra00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	2
gma03083	Polycomb repressive complex	2
gma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03013	Nucleocytoplasmic transport	2
gma03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04142	Lysosome	2
gma04144	Endocytosis	2
gma05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	4
mtr04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04142	Lysosome	2
sot04144	Endocytosis	2
sot05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04145	Phagosome	2
nta04148	Efferocytosis	2
nta04517	IgSF CAM signaling	2
nta04518	Integrin signaling	2
nta04620	Toll-like receptor signaling pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00240	Pyrimidine metabolism	3
osa01232	Nucleotide metabolism	3
osa04144	Endocytosis	2
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00240	Pyrimidine metabolism	3
osa01232	Nucleotide metabolism	3
osa01250	Biosynthesis of nucleotide sugars	2
osa01240	Biosynthesis of cofactors	2
osa00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04626	Plant-pathogen interaction	3
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00513	Various types of N-glycan biosynthesis	3
zma00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	3
tae00520	Amino sugar and nucleotide sugar metabolism	3
tae01250	Biosynthesis of nucleotide sugars	3
tae00010	Glycolysis / Gluconeogenesis	3
tae00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01250	Biosynthesis of nucleotide sugars	4
tae00190	Oxidative phosphorylation	3
tae00020	Citrate cycle (TCA cycle)	3
tae00270	Cysteine and methionine metabolism	3
tae00566	Sulfoquinovose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	2
hvu00520	Amino sugar and nucleotide sugar metabolism	2
hvu01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00520	Amino sugar and nucleotide sugar metabolism	2
hvu01250	Biosynthesis of nucleotide sugars	2

Expression

Expression pattern

Entrez Gene ID^*

107895352

107916591

121230895

839718

841738

103871160

103829026

103832699

106376751

106358054

106382172

102625940

102625961

100804922

100783387

100810247

100246918

100256311

18095581

7477403

7462332

11441256

25493158

11413571

101247562

101259611

102589017

102582809

102590306

107820391

107771955

107773981

4323906

4339416

103630624

100382081

123064611

123140418

123182657

123447017

123448670

8067528

8085901

100838689

100826851

The preparation time of this page was 0.6 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	3	3	2	3	2	3	3	2	3	3	2	2	3	2	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107915252 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107915252 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**