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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107915412   1-aminocyclopropane-1-carboxylate oxidase 3-like 
 ghi-r.1   107950208   1-aminocyclopropane-1-carboxylate oxidase 3 
 ghi-r.1   107945007   1-aminocyclopropane-1-carboxylate oxidase 1-like 
 ghi-r.1   107923209   1-aminocyclopropane-1-carboxylate oxidase 
 ath-u.5   AT1G12010   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 ath-u.5   EFE   ethylene-forming enzyme 
 ath-u.5   ACO2   ACC oxidase 2 
 bra-r.6   103872037   1-aminocyclopropane-1-carboxylate oxidase 3 
 bra-r.6   103848186   1-aminocyclopropane-1-carboxylate oxidase 
 bra-r.6   103844184   1-aminocyclopropane-1-carboxylate oxidase 4 
 bna-r.1   125594731   1-aminocyclopropane-1-carboxylate oxidase-like 
 bna-r.1   106423689   1-aminocyclopropane-1-carboxylate oxidase 4 
 bna-r.1   106412278   1-aminocyclopropane-1-carboxylate oxidase 3 
 cit-r.1   102577997   ACC oxidase 
 cit-r.1   102611528   1-aminocyclopropane-1-carboxylate oxidase 
 gma-u.5   100792063   1-aminocyclopropane-1-carboxylate oxidase 
 gma-u.5   100819184   1-aminocyclopropane-1-carboxylate oxidase-like 
 gma-u.5   100815336   1-aminocyclopropane-1-carboxylate oxidase-like 
 vvi-u.5   100256784   1-aminocyclopropane-1-carboxylic acid oxidase 2 
 vvi-u.5   100232928   1-aminocyclopropane-1-carboxylate oxidase 
 ppo-u.5   7484327   1-aminocyclopropane-1-carboxylate oxidase 
 ppo-u.5   7489875   1-aminocyclopropane-1-carboxylate oxidase 
 ppo-u.5   7468528   1-aminocyclopropane-1-carboxylate oxidase 
 mtr-u.5   11437005   1-aminocyclopropane-1-carboxylate oxidase 
 mtr-u.5   25494301   1-aminocyclopropane-1-carboxylate oxidase 
 mtr-u.5   11425703   1-aminocyclopropane-1-carboxylate oxidase 
 sly-u.5   ACO6   1-aminocyclopropane-1-carboxylate oxidase 
 sly-u.5   ACO2   1-aminocyclopropane-1-carboxylate oxidase 
 sly-u.5   ACO4   1-aminocyclopropane-1-carboxylate oxidase 
 sot-r.1   102592023   1-aminocyclopropane-1-carboxylate oxidase 2 
 sot-r.1   102584835   1-aminocyclopropane-1-carboxylate oxidase-like 
 sot-r.1   102584001   1-aminocyclopropane-1-carboxylate oxidase 4 
 nta-r.1   107809374   1-aminocyclopropane-1-carboxylate oxidase 
 nta-r.1   107759912   1-aminocyclopropane-1-carboxylate oxidase-like 
 nta-r.1   107808257   1-aminocyclopropane-1-carboxylate oxidase 1-like 
 osa-u.5   4347224   1-aminocyclopropane-1-carboxylate oxidase 1 
 osa-u.5   4347225   1-aminocyclopropane-1-carboxylate oxidase 1-like 
 osa-u.5   4330873   1-aminocyclopropane-1-carboxylate oxidase 1 
 zma-u.5   100382364   uncharacterized LOC100382364 
 zma-u.5   542137   ACC oxidase20 
 zma-u.5   100191321   1-aminocyclopropane-1-carboxylate oxidase 1Acc oxidase 
 tae-r.2   123138394   1-aminocyclopropane-1-carboxylate oxidase 1 
 tae-r.2   123134621   1-aminocyclopropane-1-carboxylate oxidase 3 
 tae-r.2   123128531   1-aminocyclopropane-1-carboxylate oxidase 3 
 hvu-r.1   123404350   1-aminocyclopropane-1-carboxylate oxidase-like 
 hvu-r.1   123404484   1-aminocyclopropane-1-carboxylate oxidase 1-like 
 hvu-r.1   123398535   1-aminocyclopropane-1-carboxylate oxidase 1-like 
 sbi-r.1   8078948   1-aminocyclopropane-1-carboxylate oxidase 1 
 sbi-r.1   8081032   1-aminocyclopropane-1-carboxylate oxidase 1 
 bdi-r.1   100838946   1-aminocyclopropane-1-carboxylate oxidase 1 
 bdi-r.1   100826865   1-aminocyclopropane-1-carboxylate oxidase 1 

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Top 50 coexpressed genes to 107915412 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107915412 (ghi-r.1 coexpression data)

CoexMap"107915412"


ghiLOC107915412 | Entrez gene ID : 107915412    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 2 3 2 3 3 3 3 3 3 3 3 3 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00270 [list] [network] Cysteine and methionine metabolism (291 genes)
GO BP
GO CC
GO MF
Protein NP_001314051.1 [sequence] [blastp]
Subcellular
localization
wolf
cysk 6,  cyto 2,  pero 1,  E.R._vacu 1  (predict for NP_001314051.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001314051.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107915412
ghi-r.1
for
107950208
ghi-r.1
for
107945007
ghi-r.1
for
107923209
ath-u.5
for
AT1G12010
ath-u.5
for
EFE
ath-u.5
for
ACO2
bra-r.6
for
103872037
bra-r.6
for
103848186
bra-r.6
for
103844184
bna-r.1
for
125594731
bna-r.1
for
106423689
bna-r.1
for
106412278
cit-r.1
for
102577997
cit-r.1
for
102611528
gma-u.5
for
100792063
gma-u.5
for
100819184
gma-u.5
for
100815336
vvi-u.5
for
100256784
vvi-u.5
for
100232928
ppo-u.5
for
7484327
ppo-u.5
for
7489875
ppo-u.5
for
7468528
mtr-u.5
for
11437005
mtr-u.5
for
25494301
mtr-u.5
for
11425703
sly-u.5
for
ACO6
sly-u.5
for
ACO2
sly-u.5
for
ACO4
sot-r.1
for
102592023
sot-r.1
for
102584835
sot-r.1
for
102584001
nta-r.1
for
107809374
nta-r.1
for
107759912
nta-r.1
for
107808257
osa-u.5
for
4347224
osa-u.5
for
4347225
osa-u.5
for
4330873
zma-u.5
for
100382364
zma-u.5
for
542137
zma-u.5
for
100191321
tae-r.2
for
123138394
tae-r.2
for
123134621
tae-r.2
for
123128531
hvu-r.1
for
123404350
hvu-r.1
for
123404484
hvu-r.1
for
123398535
sbi-r.1
for
8078948
sbi-r.1
for
8081032
bdi-r.1
for
100838946
bdi-r.1
for
100826865


Ortholog ID: 713
Species ghi ghi ghi ath ath ath bra bra bra bna bna bna cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi bdi bdi
Symbol LOC107945007 LOC107923209 LOC121232137 AT1G12010 EFE ACO2 LOC103872037 LOC103844184 LOC103843208 LOC106390528 LOC106376249 LOC106356023 LOC102577997 LOC102611528 LOC100807427 LOC100784455 LOC100820256 LOC100256784 LOC100232928 LOC7484327 LOC7489875 LOC18097294 LOC25494301 LOC11425703 LOC11445019 ACO4 ACO1 EFE LOC102592023 LOC102584835 ACO2 LOC107808257 LOC107773205 LOC107781126 LOC4347224 LOC4347225 LOC4330873 LOC100382364 LOC542137 LOC100191321 LOC123121703 LOC123121702 LOC123178015 LOC123404350 LOC123398535 LOC123398536 LOC8078948 LOC8081032 LOC100838946 LOC100826865
Function* 1-aminocyclopropane-1-carboxylate oxidase 1-like 1-aminocyclopropane-1-carboxylate oxidase 1-aminocyclopropane-1-carboxylate oxidase 3 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ethylene-forming enzyme ACC oxidase 2 1-aminocyclopropane-1-carboxylate oxidase 3 1-aminocyclopropane-1-carboxylate oxidase 4 1-aminocyclopropane-1-carboxylate oxidase 3 1-aminocyclopropane-1-carboxylate oxidase 1-aminocyclopropane-1-carboxylate oxidase 3 1-aminocyclopropane-1-carboxylate oxidase 5-like ACC oxidase 1-aminocyclopropane-1-carboxylate oxidase 1-aminocyclopropane-1-carboxylate oxidase-like putative 1-aminocyclopropane-1-carboxylate oxidase 1-aminocyclopropane-1-carboxylate oxidase 1-aminocyclopropane-1-carboxylic acid oxidase 2 1-aminocyclopropane-1-carboxylate oxidase 1-aminocyclopropane-1-carboxylate oxidase 1-aminocyclopropane-1-carboxylate oxidase 1-aminocyclopropane-1-carboxylate oxidase 1-aminocyclopropane-1-carboxylate oxidase 1-aminocyclopropane-1-carboxylate oxidase 1-aminocyclopropane-1-carboxylate oxidase 1-aminocyclopropane-1-carboxylate oxidase 1-aminocyclopropane-1-carboxylate oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1-aminocyclopropane-1-carboxylate oxidase 2 1-aminocyclopropane-1-carboxylate oxidase-like 1-aminocyclopropane-1-carboxylate oxidase 1-aminocyclopropane-1-carboxylate oxidase 1-like 1-aminocyclopropane-1-carboxylate oxidase 3-like 1-aminocyclopropane-1-carboxylate oxidase 1-aminocyclopropane-1-carboxylate oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1-like 1-aminocyclopropane-1-carboxylate oxidase 1 uncharacterized LOC100382364 ACC oxidase20 1-aminocyclopropane-1-carboxylate oxidase 1Acc oxidase 1-aminocyclopropane-1-carboxylate oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1-like 1-aminocyclopropane-1-carboxylate oxidase-like 1-aminocyclopropane-1-carboxylate oxidase 1-like 1-aminocyclopropane-1-carboxylate oxidase 1-like 1-aminocyclopropane-1-carboxylate oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00270 Cysteine and methionine metabolism 4
ath00480 Glutathione metabolism 2
ath01200 Carbon metabolism 2
ath01230 Biosynthesis of amino acids 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 3
ath00270 Cysteine and methionine metabolism 3
ath04016 MAPK signaling pathway - plant 3
ath00480 Glutathione metabolism 2
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 5
gma04016 MAPK signaling pathway - plant 4
gma00270 Cysteine and methionine metabolism 2
gma00460 Cyanoamino acid metabolism 2
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 5
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00270 Cysteine and methionine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 5
ppo00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 7
ppo00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00270 Cysteine and methionine metabolism 2
mtr00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 3
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr00240 Pyrimidine metabolism 2
mtr00410 beta-Alanine metabolism 2
mtr00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 4
mtr04075 Plant hormone signal transduction 4
mtr00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00270 Cysteine and methionine metabolism 3
sly00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 5
sly04075 Plant hormone signal transduction 5
sly00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
sot00940 Phenylpropanoid biosynthesis 3
sot04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00270 Cysteine and methionine metabolism 2
sot00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 6
nta00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 6
nta00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 8
osa00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
osa00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00270 Cysteine and methionine metabolism 6
zma00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00270 Cysteine and methionine metabolism 3
zma00590 Arachidonic acid metabolism 2
zma00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 6
tae00908 Zeatin biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 6
hvu00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00270 Cysteine and methionine metabolism 4
sbi04075 Plant hormone signal transduction 4
sbi04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi00270 Cysteine and methionine metabolism 4
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107945007 107923209 121232137 837753 839345 842536 103872037 103844184 103843208 106390528 106376249 106356023 102577997 102611528 100807427 100784455 100820256 100256784 100232928 7484327 7489875 18097294 25494301 11425703 11445019 543506 544052 544285 102592023 102584835 102577821 107808257 107773205 107781126 4347224 4347225 4330873 100382364 542137 100191321 123121703 123121702 123178015 123404350 123398535 123398536 8078948 8081032 100838946 100826865
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