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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107916366   uncharacterized LOC107916366 
 ghi-r.1   107897392   uncharacterized LOC107897392 
 ath-u.5   AT3G13740   Ribonuclease III family protein 
 ath-u.5   AT1G55140   Ribonuclease III family protein 
 bra-r.6   103870100   mini-ribonuclease 3 
 bra-r.6   103832611   mini-ribonuclease 3 
 bna-r.1   106443535   mini-ribonuclease 3 
 bna-r.1   BNAC05G39580D   uncharacterized BNAC05G39580D 
 bna-r.1   106415588   mini-ribonuclease 3 
 cit-r.1   102608947   uncharacterized LOC102608947 
 gma-u.5   100527214   uncharacterized LOC100527214 
 vvi-u.5   100242891   uncharacterized LOC100242891 
 ppo-u.5   18096746   uncharacterized LOC18096746 
 ppo-u.5   7480055   uncharacterized LOC7480055 
 mtr-u.5   11421489   mini-ribonuclease 3 
 sly-u.5   101268172   Ribonuclease III 
 sot-r.1   102590276   mini-ribonuclease 3-like 
 nta-r.1   107795778   uncharacterized LOC107795778 
 nta-r.1   107816863   uncharacterized LOC107816863 
 osa-u.5   4338401   uncharacterized LOC4338401 
 osa-u.5   4350155   uncharacterized LOC4350155 
 zma-u.5   100193763   uncharacterized LOC100193763 
 tae-r.2   123060343   mini-ribonuclease 3 
 tae-r.2   123077399   mini-ribonuclease 3 
 tae-r.2   123068872   mini-ribonuclease 3 
 hvu-r.1   123442874   mini-ribonuclease 3-like 
 sbi-r.1   110433582   mini-ribonuclease 3-like 
 bdi-r.1   100826428   mini-ribonuclease 3 
 cre-r.1   CHLRE_11g482841v5   uncharacterized protein 
 cre-r.1   CHLRE_07g354800v5   uncharacterized protein 

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Top 50 coexpressed genes to 107916366 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107916366 (ghi-r.1 coexpression data)

CoexMap"107916366"


ghiLOC107916366 | Entrez gene ID : 107916366    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 2 2 3 1 1 1 2 1 1 1 2 2 1 3 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006396 [list] [network] RNA processing  (1369 genes)  IEA  
GO CC
GO MF
GO:0004525 [list] [network] ribonuclease III activity  (27 genes)  IEA  
Protein XP_016701121.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_016701121.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_016701121.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107916366
ghi-r.1
for
107897392
ath-u.5
for
AT3G13740
ath-u.5
for
AT1G55140
bra-r.6
for
103870100
bra-r.6
for
103832611
bna-r.1
for
106443535
bna-r.1
for
BNAC05G39580D
bna-r.1
for
106415588
cit-r.1
for
102608947
gma-u.5
for
100527214
vvi-u.5
for
100242891
ppo-u.5
for
18096746
ppo-u.5
for
7480055
mtr-u.5
for
11421489
sly-u.5
for
101268172
sot-r.1
for
102590276
nta-r.1
for
107795778
nta-r.1
for
107816863
osa-u.5
for
4338401
osa-u.5
for
4350155
zma-u.5
for
100193763
tae-r.2
for
123060343
tae-r.2
for
123077399
tae-r.2
for
123068872
hvu-r.1
for
123442874
sbi-r.1
for
110433582
bdi-r.1
for
100826428
cre-r.1
for
CHLRE_11g482841v5
cre-r.1
for
CHLRE_07g354800v5


Ortholog ID: 7206
Species ghi ghi ath ath bra bra bna bna bna cit gma vvi ppo ppo mtr sly sot nta nta osa osa zma tae tae tae hvu sbi bdi cre cre
Symbol LOC107916366 LOC107897392 AT3G13740 AT1G55140 LOC103870100 LOC103832611 LOC106443535 BNAC05G39580D LOC106345401 LOC102608947 LOC100527214 LOC100242891 LOC18096746 LOC7480055 LOC11421489 LOC101268172 LOC102590276 LOC107795778 LOC107816863 LOC4338401 LOC4350155 LOC100193763 LOC123060343 LOC123077399 LOC123068872 LOC123442874 LOC110433582 LOC100826428 CHLRE_11g482841v5 CHLRE_07g354800v5
Function* uncharacterized LOC107916366 uncharacterized LOC107897392 Ribonuclease III family protein Ribonuclease III family protein mini-ribonuclease 3 mini-ribonuclease 3 mini-ribonuclease 3 uncharacterized BNAC05G39580D mini-ribonuclease 3 uncharacterized LOC102608947 uncharacterized LOC100527214 uncharacterized LOC100242891 uncharacterized LOC18096746 uncharacterized LOC7480055 mini-ribonuclease 3 Ribonuclease III mini-ribonuclease 3-like uncharacterized LOC107795778 uncharacterized LOC107816863 uncharacterized LOC4338401 uncharacterized LOC4350155 uncharacterized LOC100193763 mini-ribonuclease 3 mini-ribonuclease 3 mini-ribonuclease 3 mini-ribonuclease 3-like mini-ribonuclease 3-like mini-ribonuclease 3 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
nta00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae00860 Porphyrin metabolism 3
tae03030 DNA replication 2
tae03410 Base excision repair 2
tae03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 2
tae03410 Base excision repair 2
tae03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 3
hvu03010 Ribosome 3
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 3
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107916366 107897392 820583 841957 103870100 103832611 106443535 106440616 106345401 102608947 100527214 100242891 18096746 7480055 11421489 101268172 102590276 107795778 107816863 4338401 4350155 100193763 123060343 123077399 123068872 123442874 110433582 100826428 5722963 66054230
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