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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107918559   vesicle-associated protein 2-1 
 ghi-r.1   121224317   vesicle-associated protein 1-2 
 ghi-r.1   107893914   vesicle-associated protein 1-3 
 ghi-r.1   107893155   vesicle-associated protein 2-2 
 ath-u.5   VAP27-2   vamp/synaptobrevin-associated protein 27-2 
 ath-u.5   AT1G51270   vesicle-associated protein 1-4 
 ath-u.5   AT5G47180   Plant VAMP (vesicle-associated membrane protein) family protein 
 bra-r.6   103871623   vesicle-associated protein 2-2 
 bra-r.6   103866194   vesicle-associated protein 1-2 
 bra-r.6   103862872   vesicle-associated protein 1-1 
 bna-r.1   106371213   vesicle-associated protein 1-2 
 bna-r.1   111215152   vesicle-associated protein 1-1-like 
 bna-r.1   125599567   vesicle-associated protein 2-1-like 
 cit-r.1   102611975   vesicle-associated protein 1-2 
 cit-r.1   102610348   vesicle-associated protein 1-2 
 cit-r.1   102613910   vesicle-associated protein 1-3 
 gma-u.5   100794670   vesicle-associated protein 2-2-like 
 gma-u.5   100798247   vesicle-associated protein 1-2 
 gma-u.5   100801987   vesicle-associated protein 2-2-like 
 vvi-u.5   100253999   vesicle-associated protein 1-1 
 vvi-u.5   100247810   vesicle-associated protein 1-2 
 ppo-u.5   7473901   vesicle-associated protein 1-2 
 ppo-u.5   18105191   vesicle-associated protein 1-2 
 ppo-u.5   18094564   vesicle-associated protein 1-2 
 mtr-u.5   11428421   vesicle-associated protein 2-1 
 mtr-u.5   11426935   vesicle-associated protein 1-2 
 sly-u.5   101245870   vesicle-associated protein 2-1 
 sly-u.5   101245885   vesicle-associated membrane protein 
 sly-u.5   101248682   vesicle-associated protein 1-1 
 sot-r.1   102588851   vesicle-associated protein 2-2-like 
 sot-r.1   102587524   vesicle-associated protein 1-2-like 
 sot-r.1   102583399   vesicle-associated protein 1-1-like 
 nta-r.1   107766713   vesicle-associated protein 1-2 
 nta-r.1   107762211   vesicle-associated protein 1-2-like 
 nta-r.1   107760264   vesicle-associated protein 2-2 
 osa-u.5   4349070   vesicle-associated protein 1-2 
 osa-u.5   9270104   vesicle-associated protein 2-1 
 osa-u.5   4326527   vesicle-associated protein 2-2 
 zma-u.5   100280363   uncharacterized LOC100280363 
 zma-u.5   100281331   uncharacterized LOC100281331 
 zma-u.5   100304272   Vesicle-associated protein 2-1 
 tae-r.2   123137612   vesicle-associated protein 1-2 
 tae-r.2   123144974   vesicle-associated protein 2-1 
 tae-r.2   123147352   vesicle-associated protein 1-3 
 hvu-r.1   123408940   vesicle-associated protein 1-3-like 
 hvu-r.1   123407531   vesicle-associated protein 1-2-like 
 hvu-r.1   123403729   vesicle-associated protein 1-2-like 
 sbi-r.1   8077921   vesicle-associated protein 2-2 
 sbi-r.1   8083321   vesicle-associated protein 1-2 
 sbi-r.1   8076246   vesicle-associated protein 2-1 
 bdi-r.1   100843224   vesicle-associated protein 1-2 
 bdi-r.1   100821088   vesicle-associated protein 2-2 
 bdi-r.1   100821628   vesicle-associated protein 1-2 
 cre-r.1   CHLRE_03g196900v5   uncharacterized protein 

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Top 50 coexpressed genes to 107918559 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107918559 (ghi-r.1 coexpression data)

CoexMap"107918559"


ghiLOC107918559 | Entrez gene ID : 107918559    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 3 3 2 3 2 3 3 3 3 3 3 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0061817 [list] [network] endoplasmic reticulum-plasma membrane tethering  (37 genes)  IEA  
GO:0090158 [list] [network] endoplasmic reticulum membrane organization  (50 genes)  IEA  
GO CC
GO:0005789 [list] [network] endoplasmic reticulum membrane  (634 genes)  IEA  
GO:0005886 [list] [network] plasma membrane  (2553 genes)  IEA  
GO MF
Protein XP_016703626.1 [sequence] [blastp]
XP_016703628.1 [sequence] [blastp]
XP_016703629.1 [sequence] [blastp]
XP_016703630.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 1,  E.R._plas 1,  plas 1,  E.R. 1,  chlo 1,  vacu 1,  cyto_pero 1  (predict for XP_016703626.1)
nucl 5,  cyto 1,  E.R._plas 1,  plas 1,  E.R. 1,  chlo 1,  vacu 1,  cyto_pero 1  (predict for XP_016703628.1)
nucl 5,  cyto 1,  E.R._plas 1,  plas 1,  E.R. 1,  chlo 1,  vacu 1,  cyto_pero 1  (predict for XP_016703629.1)
nucl 5,  cyto 1,  E.R._plas 1,  plas 1,  E.R. 1,  chlo 1,  vacu 1,  cyto_pero 1  (predict for XP_016703630.1)
Subcellular
localization
TargetP
other 7  (predict for XP_016703626.1)
other 7  (predict for XP_016703628.1)
other 7  (predict for XP_016703629.1)
other 7  (predict for XP_016703630.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107918559
ghi-r.1
for
121224317
ghi-r.1
for
107893914
ghi-r.1
for
107893155
ath-u.5
for
VAP27-2
ath-u.5
for
AT1G51270
ath-u.5
for
AT5G47180
bra-r.6
for
103871623
bra-r.6
for
103866194
bra-r.6
for
103862872
bna-r.1
for
106371213
bna-r.1
for
111215152
bna-r.1
for
125599567
cit-r.1
for
102611975
cit-r.1
for
102610348
cit-r.1
for
102613910
gma-u.5
for
100794670
gma-u.5
for
100798247
gma-u.5
for
100801987
vvi-u.5
for
100253999
vvi-u.5
for
100247810
ppo-u.5
for
7473901
ppo-u.5
for
18105191
ppo-u.5
for
18094564
mtr-u.5
for
11428421
mtr-u.5
for
11426935
sly-u.5
for
101245870
sly-u.5
for
101245885
sly-u.5
for
101248682
sot-r.1
for
102588851
sot-r.1
for
102587524
sot-r.1
for
102583399
nta-r.1
for
107766713
nta-r.1
for
107762211
nta-r.1
for
107760264
osa-u.5
for
4349070
osa-u.5
for
9270104
osa-u.5
for
4326527
zma-u.5
for
100280363
zma-u.5
for
100281331
zma-u.5
for
100304272
tae-r.2
for
123137612
tae-r.2
for
123144974
tae-r.2
for
123147352
hvu-r.1
for
123408940
hvu-r.1
for
123407531
hvu-r.1
for
123403729
sbi-r.1
for
8077921
sbi-r.1
for
8083321
sbi-r.1
for
8076246
bdi-r.1
for
100843224
bdi-r.1
for
100821088
bdi-r.1
for
100821628
cre-r.1
for
CHLRE_03g196900v5


Ortholog ID: 149
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit cit cit gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sly sot sot sot nta nta osa osa osa zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol LOC107891989 LOC107886082 LOC107912218 VAP27-2 AT1G51270 LOC103866194 LOC103839543 LOC103843379 LOC111215152 LOC106381872 LOC106416681 LOC102611975 LOC102615081 LOC102630951 LOC100798247 LOC100805159 LOC100253999 LOC100247810 LOC7453956 LOC7471620 LOC7453954 LOC11424030 LOC11412003 LOC101264447 LOC101251624 LOC101244994 LOC102583399 LOC102579309 LOC102594610 LOC107787792 LOC107782406 LOC9270104 LOC4344689 LOC112936046 LOC100384528 LOC100217097 LOC123144974 LOC123189780 LOC123127846 LOC123408940 LOC123427348 LOC8077921 LOC8083321 LOC8062286 LOC100821088 LOC100821628 LOC100841035 CHLRE_03g196900v5
Function* vesicle-associated protein 2-2 vesicle-associated protein 1-2 vesicle-associated protein 1-2 vamp/synaptobrevin-associated protein 27-2 vesicle-associated protein 1-4 vesicle-associated protein 1-2 vesicle-associated protein 2-1 vesicle-associated protein 2-2 vesicle-associated protein 1-1-like vesicle-associated protein 2-1 vesicle-associated protein 2-1 vesicle-associated protein 1-2 vesicle-associated protein 2-2-like vesicle-associated protein 2-1 vesicle-associated protein 1-2 vesicle-associated protein 1-2 vesicle-associated protein 1-1 vesicle-associated protein 1-2 vesicle-associated protein 1-3 vesicle-associated protein 1-2 vesicle-associated protein 1-2 vesicle-associated protein 1-2 vesicle-associated protein 1-2 vesicle-associated protein 1-1-like vesicle-associated protein 2-2 vesicle-associated protein 1-1 vesicle-associated protein 1-1-like vesicle-associated protein 1-1 vesicle-associated protein 2-1 vesicle-associated protein 2-1 vesicle-associated protein 2-1-like vesicle-associated protein 2-1 vesicle-associated protein 1-3 vesicle-associated protein 1-3 Vesicle-associated protein 2-2 uncharacterized LOC100217097 vesicle-associated protein 2-1 vesicle-associated protein 1-2 vesicle-associated protein 1-2 vesicle-associated protein 1-3-like vesicle-associated protein 1-2-like vesicle-associated protein 2-2 vesicle-associated protein 1-2 vesicle-associated protein 1-1 vesicle-associated protein 2-2 vesicle-associated protein 1-2 vesicle-associated protein 2-1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi03022 Basal transcription factors 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00790 Folate biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00100 Steroid biosynthesis 2
ghi04144 Endocytosis 2
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 5
bra04145 Phagosome 2
bra04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
bra04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 3
bna01040 Biosynthesis of unsaturated fatty acids 3
bna01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00620 Pyruvate metabolism 7
gma01200 Carbon metabolism 7
gma00640 Propanoate metabolism 5
gma00061 Fatty acid biosynthesis 4
gma01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 5
gma04145 Phagosome 3
gma04148 Efferocytosis 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00940 Phenylpropanoid biosynthesis 5
vvi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 6
ppo00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
ppo00230 Purine metabolism 2
ppo01232 Nucleotide metabolism 2
ppo00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
mtr04136 Autophagy - other 2
mtr04382 Cornified envelope formation 2
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta00330 Arginine and proline metabolism 2
nta00440 Phosphonate and phosphinate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta00100 Steroid biosynthesis 4
nta00380 Tryptophan metabolism 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04145 Phagosome 4
tae04148 Efferocytosis 4
tae04517 IgSF CAM signaling 4
tae04518 Integrin signaling 4
tae04620 Toll-like receptor signaling pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 11
tae03082 ATP-dependent chromatin remodeling 3
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu03030 DNA replication 2
hvu03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04148 Efferocytosis 2
bdi00564 Glycerophospholipid metabolism 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
bdi04136 Autophagy - other 2
bdi00190 Oxidative phosphorylation 2
bdi04145 Phagosome 2
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 3
cre03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107891989 107886082 107912218 837404 841550 103866194 103839543 103843379 111215152 106381872 106416681 102611975 102615081 102630951 100798247 100805159 100253999 100247810 7453956 7471620 7453954 11424030 11412003 101264447 101251624 101244994 102583399 102579309 102594610 107787792 107782406 9270104 4344689 112936046 100384528 100217097 123144974 123189780 123127846 123408940 123427348 8077921 8083321 8062286 100821088 100821628 100841035 5718770
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