Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107918843   structure-specific endonuclease subunit slx1 
 ghi-r.1   107950738   structure-specific endonuclease subunit slx1 
 ath-u.5   AT5G43210   Excinuclease ABC, C subunit, N-terminal 
 cit-r.1   102609773   structure-specific endonuclease subunit slx1 
 gma-u.5   100805152   structure-specific endonuclease subunit slx1 
 vvi-u.5   109121452   structure-specific endonuclease subunit slx1 
 ppo-u.5   7480056   structure-specific endonuclease subunit SLX1 
 ppo-u.5   7465138   structure-specific endonuclease subunit slx1 
 mtr-u.5   25479421   structure-specific endonuclease subunit slx1 
 sly-u.5   101261747   structure-specific endonuclease subunit slx1 
 sot-r.1   102598472   structure-specific endonuclease subunit SLX1 
 nta-r.1   107777740   uncharacterized LOC107777740 
 nta-r.1   107774523   uncharacterized LOC107774523 
 osa-u.5   4351480   structure-specific endonuclease subunit slx1 
 osa-u.5   9267637   structure-specific endonuclease subunit slx1 
 zma-u.5   100284153   holiday junction resolvase, S1x1p, URI domain nuclease 
 tae-r.2   123096607   structure-specific endonuclease subunit slx1 
 tae-r.2   123086368   structure-specific endonuclease subunit slx1 
 hvu-r.1   123446253   structure-specific endonuclease subunit slx1 
 sbi-r.1   8070342   structure-specific endonuclease subunit slx1 
 bdi-r.1   100842997   structure-specific endonuclease subunit slx1 
 cre-r.1   CHLRE_09g412700v5   uncharacterized protein 

close


Top 50 coexpressed genes to 107918843 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107918843 (ghi-r.1 coexpression data)

CoexMap"107918843"


ghiLOC107918843 | Entrez gene ID : 107918843    
Species ghi ath cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre bra bna
Paralog 2 1 1 1 1 2 1 1 1 2 2 1 2 1 1 1 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03460 [list] [network] Fanconi anemia pathway (91 genes)
GO BP
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (150 genes)  IEA  
GO CC
GO:0033557 [list] [network] Slx1-Slx4 complex  (7 genes)  IEA  
GO MF
GO:0008821 [list] [network] crossover junction DNA endonuclease activity  (13 genes)  IEA  
GO:0017108 [list] [network] 5'-flap endonuclease activity  (29 genes)  IEA  
Protein XP_016703918.1 [sequence] [blastp]
XP_016703923.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 2,  chlo 1,  plas 1  (predict for XP_016703918.1)
nucl 6,  mito 2,  chlo 1,  plas 1  (predict for XP_016703923.1)
Subcellular
localization
TargetP
other 4  (predict for XP_016703918.1)
chlo 7  (predict for XP_016703923.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107918843
ghi-r.1
for
107950738
ath-u.5
for
AT5G43210
cit-r.1
for
102609773
gma-u.5
for
100805152
vvi-u.5
for
109121452
ppo-u.5
for
7480056
ppo-u.5
for
7465138
mtr-u.5
for
25479421
sly-u.5
for
101261747
sot-r.1
for
102598472
nta-r.1
for
107777740
nta-r.1
for
107774523
osa-u.5
for
4351480
osa-u.5
for
9267637
zma-u.5
for
100284153
tae-r.2
for
123096607
tae-r.2
for
123086368
hvu-r.1
for
123446253
sbi-r.1
for
8070342
bdi-r.1
for
100842997
cre-r.1
for
CHLRE_09g412700v5


Ortholog ID: 10354
Species ghi ghi ath cit gma vvi ppo ppo mtr sly sot nta nta osa osa zma tae tae hvu sbi bdi cre
Symbol LOC107918843 LOC107950738 AT5G43210 LOC102609773 LOC100805152 LOC109121452 LOC7480056 LOC7465138 LOC25479421 LOC101261747 LOC102598472 LOC107777740 LOC107774523 LOC4351480 LOC9267637 LOC100284153 LOC123096607 LOC123086368 LOC123446253 LOC8070342 LOC100842997 CHLRE_09g412700v5
Function* structure-specific endonuclease subunit slx1 structure-specific endonuclease subunit slx1 Excinuclease ABC, C subunit, N-terminal structure-specific endonuclease subunit slx1 structure-specific endonuclease subunit slx1 structure-specific endonuclease subunit slx1 structure-specific endonuclease subunit SLX1 structure-specific endonuclease subunit slx1 structure-specific endonuclease subunit slx1 structure-specific endonuclease subunit slx1 structure-specific endonuclease subunit SLX1 uncharacterized LOC107777740 uncharacterized LOC107774523 structure-specific endonuclease subunit slx1 structure-specific endonuclease subunit slx1 holiday junction resolvase, S1x1p, URI domain nuclease structure-specific endonuclease subunit slx1 structure-specific endonuclease subunit slx1 structure-specific endonuclease subunit slx1 structure-specific endonuclease subunit slx1 structure-specific endonuclease subunit slx1 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 3
ghi03460 Fanconi anemia pathway 2
ghi00330 Arginine and proline metabolism 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 3
ghi03460 Fanconi anemia pathway 2
ghi00330 Arginine and proline metabolism 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
ppo00230 Purine metabolism 2
ppo00240 Pyrimidine metabolism 2
ppo01232 Nucleotide metabolism 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
ppo03250 Viral life cycle - HIV-1 2
ppo03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 4
nta04142 Lysosome 4
nta04145 Phagosome 4
nta03010 Ribosome 2
nta00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 6
nta00010 Glycolysis / Gluconeogenesis 2
nta00071 Fatty acid degradation 2
nta00350 Tyrosine metabolism 2
nta00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 10
osa03020 RNA polymerase 2
osa03420 Nucleotide excision repair 2
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 3
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107918843 107950738 834339 102609773 100805152 109121452 7480056 7465138 25479421 101261747 102598472 107777740 107774523 4351480 9267637 100284153 123096607 123086368 123446253 8070342 100842997 66054899
The preparation time of this page was 0.1 [sec].