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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107920724   ubiquitin-conjugating enzyme E2 36 
 ath-u.5   UBC36   ubiquitin-conjugating enzyme 36 
 ath-u.5   UBC35   ubiquitin-conjugating enzyme 35 
 gma-u.5   100805631   ubiquitin-conjugating enzyme E2 35-like 
 gma-u.5   100804355   ubiquitin-conjugating enzyme E2 36 
 gma-u.5   100500231   uncharacterized LOC100500231 
 vvi-u.5   100255523   ubiquitin-conjugating enzyme E2 36 
 vvi-u.5   100254005   ubiquitin-conjugating enzyme E2-like 
 ppo-u.5   7455955   ubiquitin-conjugating enzyme E2 35 
 ppo-u.5   18095503   ubiquitin-conjugating enzyme E2 36 
 mtr-u.5   120575836   ubiquitin-conjugating enzyme E2 36 
 mtr-u.5   25487247   ubiquitin-conjugating enzyme E2 35 
 sly-u.5   Ubc13-2   ubiquitin-conjugating enzyme E2 36-like 
 sly-u.5   Fni3   ubiquitin-conjugating enzyme E2 35-like 
 zma-u.5   100281972   ubiquitin-conjugating enzyme E2 N 
 zma-u.5   103651370   ubiquitin-conjugating enzyme E2 36 
 zma-u.5   100272559   putative ubiquitin-conjugating enzyme family 

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Top 50 coexpressed genes to 107920724 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107920724 (ghi-r.1 coexpression data)

CoexMap"107920724"


ghiLOC107920724 | Entrez gene ID : 107920724    
Species ghi ath gma vvi ppo mtr sly zma bdi hvu bra cit bna sbi osa sot nta cre tae
Paralog 1 2 3 2 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04120 [list] [network] Ubiquitin mediated proteolysis (368 genes)
GO BP
GO:0070534 [list] [network] protein K63-linked ubiquitination  (22 genes)  IEA  
GO:0006301 [list] [network] DNA damage tolerance  (40 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0061631 [list] [network] ubiquitin conjugating enzyme activity  (56 genes)  IEA  
Protein XP_016706047.1 [sequence] [blastp]
XP_016706048.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 3,  cyto 1,  nucl 1,  plas 1,  nucl_plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_016706047.1)
mito 6,  chlo 2,  cyto 2  (predict for XP_016706048.1)
Subcellular
localization
TargetP
other 4  (predict for XP_016706047.1)
other 4  (predict for XP_016706048.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107920724
ath-u.5
for
UBC36
ath-u.5
for
UBC35
gma-u.5
for
100805631
gma-u.5
for
100804355
gma-u.5
for
100500231
vvi-u.5
for
100255523
vvi-u.5
for
100254005
ppo-u.5
for
7455955
ppo-u.5
for
18095503
mtr-u.5
for
120575836
mtr-u.5
for
25487247
sly-u.5
for
Ubc13-2
sly-u.5
for
Fni3
zma-u.5
for
100281972
zma-u.5
for
103651370
zma-u.5
for
100272559


Ortholog ID: 1889
Species ghi ghi ath ath bra bra bna bna cit cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta zma zma tae tae hvu hvu sbi sbi bdi cre
Symbol LOC107886608 LOC107918116 UBC36 UBC35 LOC103842824 LOC103832364 LOC106353433 LOC106415137 LOC102577935 LOC102609816 LOC100804355 LOC100500231 LOC100255523 LOC100254005 LOC18095503 LOC7455955 LOC120575836 LOC25487247 Fni3 Ubc13-2 LOC102586208 LOC102604957 LOC107763735 LOC107789165 LOC101202705 LOC103651370 LOC123111694 LOC123121237 LOC123395686 LOC123444079 LOC110432875 LOC8068001 LOC100825911 CHLRE_01g026600v5
Function* ubiquitin-conjugating enzyme E2 35 ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme 36 ubiquitin-conjugating enzyme 35 ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme E2 36-like ubiquitin-conjugating enzyme E2 36-like ubiquitin-conjugating enzyme 13 ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme E2 36 uncharacterized LOC100500231 ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme E2-like ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme E2 35 ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme E2 35 ubiquitin-conjugating enzyme E2 35-like ubiquitin-conjugating enzyme E2 36-like ubiquitin-conjugating enzyme E2 36-like ubiquitin-conjugating enzyme E2 36-like ubiquitin-conjugating enzyme E2 35 ubiquitin-conjugating enzyme E2 36 putative ubiquitin-conjugating enzyme family ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme E2 36-like ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme E2 36-like ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme E2 36 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 8
ghi04141 Protein processing in endoplasmic reticulum 6
ghi04130 SNARE interactions in vesicular transport 2
ghi03083 Polycomb repressive complex 2
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 10
ghi04130 SNARE interactions in vesicular transport 4
ghi03083 Polycomb repressive complex 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath04136 Autophagy - other 2
ath00190 Oxidative phosphorylation 2
ath04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 5
ath00350 Tyrosine metabolism 2
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 8
bna00480 Glutathione metabolism 4
bna00280 Valine, leucine and isoleucine degradation 2
bna00650 Butanoate metabolism 2
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 4
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 4
cit03050 Proteasome 3
cit04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 7
gma04120 Ubiquitin mediated proteolysis 5
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 5
gma03050 Proteasome 3
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04145 Phagosome 4
ppo04120 Ubiquitin mediated proteolysis 3
ppo04130 SNARE interactions in vesicular transport 3
ppo04144 Endocytosis 2
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04145 Phagosome 4
ppo04120 Ubiquitin mediated proteolysis 3
ppo04144 Endocytosis 3
ppo04130 SNARE interactions in vesicular transport 3
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
sly04016 MAPK signaling pathway - plant 2
sly04075 Plant hormone signal transduction 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 7
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
sot00190 Oxidative phosphorylation 2
sot03050 Proteasome 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 4
sot04120 Ubiquitin mediated proteolysis 3
sot00010 Glycolysis / Gluconeogenesis 2
sot00020 Citrate cycle (TCA cycle) 2
sot00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 7
nta04141 Protein processing in endoplasmic reticulum 3
nta03015 mRNA surveillance pathway 2
nta00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 11
nta04141 Protein processing in endoplasmic reticulum 6
nta03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 7
zma03083 Polycomb repressive complex 2
zma04141 Protein processing in endoplasmic reticulum 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 6
tae03015 mRNA surveillance pathway 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 5
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 3
hvu04130 SNARE interactions in vesicular transport 2
hvu04144 Endocytosis 2
hvu04136 Autophagy - other 2
hvu00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 3
hvu03050 Proteasome 2
hvu04144 Endocytosis 2
hvu04145 Phagosome 2
hvu04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 4
sbi04120 Ubiquitin mediated proteolysis 3
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 5
sbi00190 Oxidative phosphorylation 3
sbi04141 Protein processing in endoplasmic reticulum 3
sbi03060 Protein export 2
sbi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107886608 107918116 838260 844224 103842824 103832364 106353433 106415137 102577935 102609816 100804355 100500231 100255523 100254005 18095503 7455955 120575836 25487247 101266538 101262054 102586208 102604957 107763735 107789165 101202705 103651370 123111694 123121237 123395686 123444079 110432875 8068001 100825911 5715298
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