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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107920740   ACT domain-containing protein ACR12 
 ghi-r.1   107962068   ACT domain-containing protein ACR11 
 ghi-r.1   107907404   ACT domain-containing protein ACR11 
 ghi-r.1   107905689   ACT domain-containing protein ACR11 
 ath-u.5   ACR12   ACT domain-containing protein 
 ath-u.5   ACR11   uridylyltransferase-like protein 
 bra-r.6   103835982   ACT domain-containing protein ACR11 
 bra-r.6   103847269   ACT domain-containing protein ACR12 
 bra-r.6   103850558   ACT domain-containing protein ACR12 
 bna-r.1   106387596   ACT domain-containing protein ACR11 
 bna-r.1   111210079   ACT domain-containing protein ACR12-like 
 bna-r.1   125580091   ACT domain-containing protein ACR12 
 cit-r.1   102614750   ACT domain-containing protein ACR12 
 cit-r.1   102622950   ACT domain-containing protein DS12, chloroplastic 
 gma-u.5   100782932   ACT domain-containing protein ACR12 
 gma-u.5   100797324   ACT domain-containing protein ACR11 
 gma-u.5   100799245   ACT domain-containing protein ACR11 
 vvi-u.5   100256240   ACT domain-containing protein ACR12 
 vvi-u.5   100853428   ACT domain-containing protein ACR11 
 ppo-u.5   7469489   ACT domain-containing protein ACR11 
 ppo-u.5   7486848   ACT domain-containing protein ACR11 
 ppo-u.5   7490897   ACT domain-containing protein ACR12 
 mtr-u.5   25487982   ACT domain-containing protein ACR11 
 mtr-u.5   25485583   ACT domain-containing protein ACR12 
 mtr-u.5   11424765   ACT domain-containing protein ACR11 
 sly-u.5   101249372   ACT domain-containing protein 
 sly-u.5   101249904   uncharacterized LOC101249904 
 sly-u.5   101267668   ACT domain-containing protein 
 sot-r.1   102584926   ACT domain-containing protein DS12, chloroplastic-like 
 sot-r.1   102606036   ACT domain-containing protein ACR12-like 
 sot-r.1   102596379   ACT domain-containing protein ACR11-like 
 nta-r.1   107759486   ACT domain-containing protein DS12, chloroplastic 
 nta-r.1   107769014   ACT domain-containing protein ACR11 
 nta-r.1   107774407   ACT domain-containing protein DS12, chloroplastic 
 osa-u.5   9271427   ACT domain-containing protein DS12, chloroplastic 
 osa-u.5   4351525   ACT domain-containing protein ACR12 
 zma-u.5   103649523   ACT domain-containing protein ACR12 
 zma-u.5   100383740   uncharacterized LOC100383740 
 zma-u.5   100276033   uncharacterized LOC100276033 
 tae-r.2   123170398   ACT domain-containing protein DS12, chloroplastic 
 tae-r.2   123102995   ACT domain-containing protein ACR12 
 tae-r.2   123120195   ACT domain-containing protein ACR12 
 hvu-r.1   123407291   ACT domain-containing protein DS12, chloroplastic-like 
 hvu-r.1   123396615   ACT domain-containing protein ACR12-like 
 sbi-r.1   8062266   ACT domain-containing protein DS12, chloroplastic 
 sbi-r.1   8066971   ACT domain-containing protein ACR12 
 bdi-r.1   100823896   ACT domain-containing protein DS12, chloroplastic 
 bdi-r.1   100843003   ACT domain-containing protein ACR12 
 cre-r.1   CHLRE_01g061077v5   uncharacterized protein 

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Top 50 coexpressed genes to 107920740 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107920740 (ghi-r.1 coexpression data)

CoexMap"107920740"


ghiLOC107920740 | Entrez gene ID : 107920740    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 2 3 2 3 3 3 3 3 2 3 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (283 genes)  IEA  
GO:0009570 [list] [network] chloroplast stroma  (302 genes)  IEA  
GO MF
Protein XP_016706075.1 [sequence] [blastp]
XP_016706076.1 [sequence] [blastp]
XP_040965803.1 [sequence] [blastp]
XP_040965804.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  cyto 1,  extr 1,  cyto_nucl 1  (predict for XP_016706075.1)
chlo 7,  nucl 1,  mito 1,  extr 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_016706076.1)
chlo 8,  nucl 1,  cyto 1,  extr 1,  cyto_nucl 1  (predict for XP_040965803.1)
chlo 7,  nucl 1,  mito 1,  extr 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_040965804.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016706075.1)
chlo 9  (predict for XP_016706076.1)
chlo 9  (predict for XP_040965803.1)
chlo 9  (predict for XP_040965804.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107920740
ghi-r.1
for
107962068
ghi-r.1
for
107907404
ghi-r.1
for
107905689
ath-u.5
for
ACR12
ath-u.5
for
ACR11
bra-r.6
for
103835982
bra-r.6
for
103847269
bra-r.6
for
103850558
bna-r.1
for
106387596
bna-r.1
for
111210079
bna-r.1
for
125580091
cit-r.1
for
102614750
cit-r.1
for
102622950
gma-u.5
for
100782932
gma-u.5
for
100797324
gma-u.5
for
100799245
vvi-u.5
for
100256240
vvi-u.5
for
100853428
ppo-u.5
for
7469489
ppo-u.5
for
7486848
ppo-u.5
for
7490897
mtr-u.5
for
25487982
mtr-u.5
for
25485583
mtr-u.5
for
11424765
sly-u.5
for
101249372
sly-u.5
for
101249904
sly-u.5
for
101267668
sot-r.1
for
102584926
sot-r.1
for
102606036
sot-r.1
for
102596379
nta-r.1
for
107759486
nta-r.1
for
107769014
nta-r.1
for
107774407
osa-u.5
for
9271427
osa-u.5
for
4351525
zma-u.5
for
103649523
zma-u.5
for
100383740
zma-u.5
for
100276033
tae-r.2
for
123170398
tae-r.2
for
123102995
tae-r.2
for
123120195
hvu-r.1
for
123407291
hvu-r.1
for
123396615
sbi-r.1
for
8062266
sbi-r.1
for
8066971
bdi-r.1
for
100823896
bdi-r.1
for
100843003
cre-r.1
for
CHLRE_01g061077v5


Ortholog ID: 1812
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC107920740 LOC107907404 LOC107933308 ACR12 ACR11 LOC103835982 LOC103847269 LOC103850558 LOC106358533 LOC111203876 LOC106415134 LOC102614750 LOC102622950 LOC100782932 LOC100799245 LOC100802060 LOC100256240 LOC100853428 LOC7486848 LOC7490897 LOC7477168 LOC25487982 LOC25485583 LOC11424765 LOC101249372 LOC101249904 LOC101267668 LOC102584926 LOC102606036 LOC102596379 LOC107759486 LOC107818354 LOC107823739 LOC9271427 LOC4351525 LOC103649523 LOC100276033 LOC100284676 LOC123170398 LOC123102995 LOC123120195 LOC123407291 LOC123396615 LOC8062266 LOC8066971 LOC100823896 LOC100843003 CHLRE_01g061077v5
Function* ACT domain-containing protein ACR12 ACT domain-containing protein ACR11 ACT domain-containing protein ACR12 ACT domain-containing protein uridylyltransferase-like protein ACT domain-containing protein ACR11 ACT domain-containing protein ACR12 ACT domain-containing protein ACR12 ACT domain-containing protein ACR12 ACT domain-containing protein ACR12-like ACT domain-containing protein ACR11 ACT domain-containing protein ACR12 ACT domain-containing protein DS12, chloroplastic ACT domain-containing protein ACR12 ACT domain-containing protein ACR11 ACT domain-containing protein ACR12 ACT domain-containing protein ACR12 ACT domain-containing protein ACR11 ACT domain-containing protein ACR11 ACT domain-containing protein ACR12 ACT domain-containing protein ACR12 ACT domain-containing protein ACR11 ACT domain-containing protein ACR12 ACT domain-containing protein ACR11 ACT domain-containing protein uncharacterized LOC101249904 ACT domain-containing protein ACT domain-containing protein DS12, chloroplastic-like ACT domain-containing protein ACR12-like ACT domain-containing protein ACR11-like ACT domain-containing protein DS12, chloroplastic ACT domain-containing protein ACR12 ACT domain-containing protein ACR12-like ACT domain-containing protein DS12, chloroplastic ACT domain-containing protein ACR12 ACT domain-containing protein ACR12 uncharacterized LOC100276033 uncharacterized LOC100284676 ACT domain-containing protein DS12, chloroplastic ACT domain-containing protein ACR12 ACT domain-containing protein ACR12 ACT domain-containing protein DS12, chloroplastic-like ACT domain-containing protein ACR12-like ACT domain-containing protein DS12, chloroplastic ACT domain-containing protein ACR12 ACT domain-containing protein DS12, chloroplastic ACT domain-containing protein ACR12 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 10
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 6
ath00260 Glycine, serine and threonine metabolism 4
ath00630 Glyoxylate and dicarboxylate metabolism 4
ath00670 One carbon pool by folate 3
ath00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 7
bra00630 Glyoxylate and dicarboxylate metabolism 6
bra00260 Glycine, serine and threonine metabolism 4
bra04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
bra03050 Proteasome 2
bra04145 Phagosome 2
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 3
bra03083 Polycomb repressive complex 2
bra04120 Ubiquitin mediated proteolysis 2
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
cit01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 3
gma01200 Carbon metabolism 3
gma04141 Protein processing in endoplasmic reticulum 2
gma00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00250 Alanine, aspartate and glutamate metabolism 3
gma01200 Carbon metabolism 3
gma00650 Butanoate metabolism 2
gma00190 Oxidative phosphorylation 2
gma00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 3
vvi04142 Lysosome 2
vvi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 4
vvi00630 Glyoxylate and dicarboxylate metabolism 3
vvi00195 Photosynthesis 2
vvi00260 Glycine, serine and threonine metabolism 2
vvi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 4
ppo00030 Pentose phosphate pathway 2
ppo00480 Glutathione metabolism 2
ppo01200 Carbon metabolism 2
ppo00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00280 Valine, leucine and isoleucine degradation 4
sly00330 Arginine and proline metabolism 3
sly00310 Lysine degradation 2
sly00260 Glycine, serine and threonine metabolism 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 6
sot03040 Spliceosome 2
sot00280 Valine, leucine and isoleucine degradation 2
sot00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
nta00480 Glutathione metabolism 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 9
osa00630 Glyoxylate and dicarboxylate metabolism 7
osa00710 Carbon fixation by Calvin cycle 6
osa01230 Biosynthesis of amino acids 6
osa00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 4
osa04146 Peroxisome 4
osa00650 Butanoate metabolism 2
osa00071 Fatty acid degradation 2
osa00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae01240 Biosynthesis of cofactors 3
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae04075 Plant hormone signal transduction 3
tae04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae04075 Plant hormone signal transduction 3
tae04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00630 Glyoxylate and dicarboxylate metabolism 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 3
sbi00460 Cyanoamino acid metabolism 2
sbi00630 Glyoxylate and dicarboxylate metabolism 2
sbi00910 Nitrogen metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 3
bdi00630 Glyoxylate and dicarboxylate metabolism 3
bdi01200 Carbon metabolism 3
bdi00010 Glycolysis / Gluconeogenesis 3
bdi00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 8
bdi04145 Phagosome 5
bdi04142 Lysosome 2
bdi03250 Viral life cycle - HIV-1 2
bdi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 4
cre01240 Biosynthesis of cofactors 3
cre00290 Valine, leucine and isoleucine biosynthesis 2
cre00966 Glucosinolate biosynthesis 2
cre01210 2-Oxocarboxylic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107920740 107907404 107933308 830352 838259 103835982 103847269 103850558 106358533 111203876 106415134 102614750 102622950 100782932 100799245 100802060 100256240 100853428 7486848 7490897 7477168 25487982 25485583 11424765 101249372 101249904 101267668 102584926 102606036 102596379 107759486 107818354 107823739 9271427 4351525 103649523 100276033 100284676 123170398 123102995 123120195 123407291 123396615 8062266 8066971 100823896 100843003 5725743
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