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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107920801   upstream activation factor subunit UAF30 
 ath-u.5   AT4G26810   SWIB/MDM2 domain superfamily protein 
 gma-u.5   100527179   uncharacterized LOC100527179 
 gma-u.5   100775234   upstream activation factor subunit UAF30 
 vvi-u.5   100247022   SWIB/MDM2 domain-containing-like 
 mtr-u.5   25489035   upstream activation factor subunit UAF30 
 sly-u.5   101265750   upstream activation factor subunit spp27 
 osa-u.5   4346458   upstream activation factor subunit spp27 
 zma-u.5   100280587   uncharacterized LOC100280587 

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Top 50 coexpressed genes to 107920801 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107920801 (ghi-r.1 coexpression data)

CoexMap"107920801"


ghiLOC107920801 | Entrez gene ID : 107920801    
Species ghi ath gma vvi mtr sly osa zma hvu bna cit bra ppo sbi bdi nta tae cre sot
Paralog 1 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
Protein XP_016706147.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto_nucl 6,  nucl 4,  cyto 4  (predict for XP_016706147.1)
Subcellular
localization
TargetP
other 5  (predict for XP_016706147.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107920801
ath-u.5
for
AT4G26810
gma-u.5
for
100527179
gma-u.5
for
100775234
vvi-u.5
for
100247022
mtr-u.5
for
25489035
sly-u.5
for
101265750
osa-u.5
for
4346458
zma-u.5
for
100280587


Ortholog ID: 10882
Species ghi ghi ath bra bra cit gma gma vvi mtr sly sot nta osa zma tae tae hvu
Symbol LOC107895172 LOC107920801 AT4G26810 LOC103866643 LOC103834832 LOC102611765 LOC100775234 LOC100527179 LOC100247022 LOC25489035 LOC101265750 LOC102601023 LOC107761532 LOC4346458 LOC100280587 LOC123106903 LOC123111516 LOC123397515
Function* upstream activation factor subunit UAF30 upstream activation factor subunit UAF30 SWIB/MDM2 domain superfamily protein upstream activation factor subunit UAF30 upstream activation factor subunit UAF30 upstream activation factor subunit UAF30 upstream activation factor subunit UAF30 uncharacterized LOC100527179 SWIB/MDM2 domain-containing-like upstream activation factor subunit UAF30 upstream activation factor subunit spp27 upstream activation factor subunit spp27 upstream activation factor subunit spp27 upstream activation factor subunit spp27 uncharacterized LOC100280587 uncharacterized LOC123106903 uncharacterized LOC123111516 uncharacterized LOC123397515
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03040 Spliceosome 4
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 5
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03040 Spliceosome 2
ghi00190 Oxidative phosphorylation 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00230 Purine metabolism 4
bra01240 Biosynthesis of cofactors 4
bra00250 Alanine, aspartate and glutamate metabolism 3
bra01232 Nucleotide metabolism 2
bra00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 4
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma03083 Polycomb repressive complex 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
sly03082 ATP-dependent chromatin remodeling 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03010 Ribosome 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 7
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
tae03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107895172 107920801 828788 103866643 103834832 102611765 100775234 100527179 100247022 25489035 101265750 102601023 107761532 4346458 100280587 123106903 123111516 123397515
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