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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107921129   pentatricopeptide repeat-containing protein At2g01740 
 ghi-r.1   107903630   pentatricopeptide repeat-containing protein At2g01740 
 ath-u.5   AT2G01740   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103839465   pentatricopeptide repeat-containing protein At2g01740 
 bna-r.1   106388870   pentatricopeptide repeat-containing protein At2g01740-like 
 bna-r.1   106402727   pentatricopeptide repeat-containing protein At2g01740 

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Top 50 coexpressed genes to 107921129 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107921129 (ghi-r.1 coexpression data)

CoexMap"107921129"


ghiLOC107921129 | Entrez gene ID : 107921129    
Species ghi ath bra bna hvu sot bdi sly nta vvi osa tae ppo zma cre mtr sbi gma cit
Paralog 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (890 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016706483.1 [sequence] [blastp]
XP_016706484.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 1,  nucl_plas 1  (predict for XP_016706483.1)
cyto 4,  nucl 3,  chlo 1,  nucl_plas 1  (predict for XP_016706484.1)
Subcellular
localization
TargetP
other 6  (predict for XP_016706483.1)
other 6  (predict for XP_016706484.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107921129
ghi-r.1
for
107903630
ath-u.5
for
AT2G01740
bra-r.6
for
103839465
bna-r.1
for
106388870
bna-r.1
for
106402727


Ortholog ID: 19230
Species ghi ghi ath bra bna bna
Symbol LOC107921129 LOC107903630 AT2G01740 LOC103839465 LOC106388870 LOC106402727
Function* pentatricopeptide repeat-containing protein At2g01740 pentatricopeptide repeat-containing protein At2g01740 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g01740 pentatricopeptide repeat-containing protein At2g01740-like pentatricopeptide repeat-containing protein At2g01740
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 5
ghi03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 5
ghi03018 RNA degradation 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107921129 107903630 814704 103839465 106388870 106402727
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