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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107921334   probable amidase At4g34880 
 bra-r.6   103853805   probable amidase At4g34880 
 bna-r.1   106416484   probable amidase At4g34880 
 bna-r.1   106400862   probable amidase At4g34880 
 cit-r.1   112495464   probable amidase At4g34880 
 cit-r.1   102624715   probable amidase At4g34880 
 gma-u.5   100781615   putative amidase C869.01-like 
 gma-u.5   100807918   probable amidase At4g34880 
 vvi-u.5   100250374   probable amidase At4g34880 
 vvi-u.5   100260628   probable amidase At4g34880 
 ppo-u.5   7472143   probable amidase At4g34880 
 ppo-u.5   18109837   probable amidase At4g34880 
 mtr-u.5   25501770   probable amidase At4g34880 
 mtr-u.5   25501769   probable amidase At4g34880 
 mtr-u.5   25501768   probable amidase At4g34880 
 sly-u.5   109119323   probable amidase At4g34880 
 sly-u.5   101257218   probable amidase At4g34880 
 sly-u.5   101255659   probable amidase At4g34880 
 sot-r.1   102579686   putative amidase C869.01 
 sot-r.1   102592174   putative amidase C869.01 
 nta-r.1   orf132   hypothetical protein 
 nta-r.1   107781388   putative amidase At4g34880 
 osa-u.5   4335108   probable amidase At4g34880 
 zma-u.5   100283862   amidase 
 tae-r.2   123177266   probable amidase At4g34880 
 tae-r.2   123178969   probable amidase At4g34880 
 hvu-r.1   123451900   probable amidase At4g34880 
 hvu-r.1   123451684   probable amidase At4g34880 
 hvu-r.1   123424857   probable amidase At4g34880 
 sbi-r.1   8080678   putative amidase C869.01 
 sbi-r.1   8080677   putative amidase C869.01 
 bdi-r.1   100835116   probable amidase At4g34880 
 bdi-r.1   100837646   probable amidase At4g34880 

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Top 50 coexpressed genes to 107921334 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107921334 (ghi-r.1 coexpression data)

CoexMap"107921334"


ghiLOC107921334 | Entrez gene ID : 107921334    
Species ghi bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre ath
Paralog 1 1 2 2 2 2 2 3 3 2 2 1 1 2 3 2 2 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00330 [list] [network] Arginine and proline metabolism (150 genes)
ghi00360 [list] [network] Phenylalanine metabolism (75 genes)
ghi00380 [list] [network] Tryptophan metabolism (147 genes)
GO BP
GO CC
GO MF
Protein XP_016706697.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 1,  mito 1,  extr 1,  vacu 1,  cyto_nucl 1,  cyto_mito 1,  cyto_pero 1,  mito_plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_016706697.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_016706697.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107921334
bra-r.6
for
103853805
bna-r.1
for
106416484
bna-r.1
for
106400862
cit-r.1
for
112495464
cit-r.1
for
102624715
gma-u.5
for
100781615
gma-u.5
for
100807918
vvi-u.5
for
100250374
vvi-u.5
for
100260628
ppo-u.5
for
7472143
ppo-u.5
for
18109837
mtr-u.5
for
25501770
mtr-u.5
for
25501769
mtr-u.5
for
25501768
sly-u.5
for
109119323
sly-u.5
for
101257218
sly-u.5
for
101255659
sot-r.1
for
102579686
sot-r.1
for
102592174
nta-r.1
for
orf132
nta-r.1
for
107781388
osa-u.5
for
4335108
zma-u.5
for
100283862
tae-r.2
for
123177266
tae-r.2
for
123178969
hvu-r.1
for
123451900
hvu-r.1
for
123451684
hvu-r.1
for
123424857
sbi-r.1
for
8080678
sbi-r.1
for
8080677
bdi-r.1
for
100835116
bdi-r.1
for
100837646


Ortholog ID: 1284
Species ghi bra bna bna cit cit gma gma vvi vvi ppo ppo mtr mtr mtr sly sly sly sot sot nta nta osa osa osa zma tae tae hvu hvu hvu sbi sbi sbi bdi bdi
Symbol LOC107921334 LOC103853805 LOC106416484 LOC106400862 LOC112495464 LOC102625290 LOC100781615 LOC100807918 LOC100250374 LOC100260628 LOC7472143 LOC7472144 LOC25501765 LOC25492802 LOC11427108 LOC109119323 LOC101257218 LOC101255659 LOC102579686 LOC102592174 LOC107781388 LOC107814976 LOC4335108 LOC4335106 LOC4335110 LOC100283862 LOC123040026 LOC123040032 LOC123451900 LOC123451684 LOC123424857 LOC8080678 LOC8080677 LOC8080676 LOC100835116 LOC100837646
Function* probable amidase At4g34880 probable amidase At4g34880 probable amidase At4g34880 probable amidase At4g34880 probable amidase At4g34880 probable amidase At4g34880 putative amidase C869.01-like probable amidase At4g34880 probable amidase At4g34880 probable amidase At4g34880 probable amidase At4g34880 probable amidase At4g34880 probable amidase At4g34880 probable amidase At4g34880 probable amidase At4g34880 probable amidase At4g34880 probable amidase At4g34880 probable amidase At4g34880 putative amidase C869.01 putative amidase C869.01 putative amidase At4g34880 putative amidase At4g34880 probable amidase At4g34880 probable amidase At4g34880 probable amidase At4g34880 amidase probable amidase At4g34880 probable amidase At4g34880 probable amidase At4g34880 probable amidase At4g34880 probable amidase At4g34880 putative amidase C869.01 putative amidase C869.01 putative amidase C869.01 probable amidase At4g34880 probable amidase At4g34880
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 6
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
bna01230 Biosynthesis of amino acids 5
bna04016 MAPK signaling pathway - plant 4
bna00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 6
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
bna01230 Biosynthesis of amino acids 5
bna04016 MAPK signaling pathway - plant 4
bna00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00330 Arginine and proline metabolism 2
cit00360 Phenylalanine metabolism 2
cit00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00330 Arginine and proline metabolism 2
cit00360 Phenylalanine metabolism 2
cit00380 Tryptophan metabolism 2
cit00904 Diterpenoid biosynthesis 2
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00511 Other glycan degradation 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00999 Biosynthesis of various plant secondary metabolites 2
gma00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00330 Arginine and proline metabolism 2
vvi00360 Phenylalanine metabolism 2
vvi00380 Tryptophan metabolism 2
vvi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
vvi04141 Protein processing in endoplasmic reticulum 2
vvi00330 Arginine and proline metabolism 2
vvi00360 Phenylalanine metabolism 2
vvi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00330 Arginine and proline metabolism 2
ppo00360 Phenylalanine metabolism 2
ppo00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00330 Arginine and proline metabolism 6
mtr00360 Phenylalanine metabolism 6
mtr00380 Tryptophan metabolism 6
mtr00620 Pyruvate metabolism 2
mtr04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00330 Arginine and proline metabolism 7
mtr00360 Phenylalanine metabolism 7
mtr00380 Tryptophan metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00330 Arginine and proline metabolism 7
mtr00360 Phenylalanine metabolism 7
mtr00380 Tryptophan metabolism 7
mtr00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
sot00460 Cyanoamino acid metabolism 2
sot00500 Starch and sucrose metabolism 2
sot00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00592 alpha-Linolenic acid metabolism 7
nta00330 Arginine and proline metabolism 2
nta00360 Phenylalanine metabolism 2
nta00380 Tryptophan metabolism 2
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta04626 Plant-pathogen interaction 2
nta04141 Protein processing in endoplasmic reticulum 2
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 5
osa00520 Amino sugar and nucleotide sugar metabolism 3
osa04075 Plant hormone signal transduction 2
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 4
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00330 Arginine and proline metabolism 5
tae00360 Phenylalanine metabolism 5
tae00380 Tryptophan metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00941 Flavonoid biosynthesis 6
tae04712 Circadian rhythm - plant 6
tae00330 Arginine and proline metabolism 5
tae00360 Phenylalanine metabolism 5
tae00380 Tryptophan metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
hvu00010 Glycolysis / Gluconeogenesis 2
hvu00020 Citrate cycle (TCA cycle) 2
hvu00620 Pyruvate metabolism 2
hvu00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00330 Arginine and proline metabolism 3
sbi00360 Phenylalanine metabolism 3
sbi00380 Tryptophan metabolism 3
sbi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00330 Arginine and proline metabolism 3
sbi00360 Phenylalanine metabolism 3
sbi00380 Tryptophan metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 3
sbi04145 Phagosome 3
sbi00330 Arginine and proline metabolism 3
sbi00360 Phenylalanine metabolism 3
sbi00380 Tryptophan metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00510 N-Glycan biosynthesis 4
bdi00513 Various types of N-glycan biosynthesis 4
bdi04141 Protein processing in endoplasmic reticulum 4
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
bdi01230 Biosynthesis of amino acids 7
bdi00330 Arginine and proline metabolism 2
bdi00260 Glycine, serine and threonine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107921334 103853805 106416484 106400862 112495464 102625290 100781615 100807918 100250374 100260628 7472143 7472144 25501765 25492802 11427108 109119323 101257218 101255659 102579686 102592174 107781388 107814976 4335108 4335106 4335110 100283862 123040026 123040032 123451900 123451684 123424857 8080678 8080677 8080676 100835116 100837646
The preparation time of this page was 3.6 [sec].