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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107921997   ABC transporter B family member 26, chloroplastic 
 ath-u.5   ABCB26   transporter associated with antigen processing protein 1 
 gma-u.5   100813359   ABC transporter B family member 26, chloroplastic 
 gma-u.5   100797529   ABC transporter B family member 26, chloroplastic 
 gma-u.5   100775951   ABC transporter B family member 26, chloroplastic 
 vvi-u.5   100249410   ABC transporter B family member 26, chloroplastic 
 vvi-u.5   100247338   ABC transporter B family member 26, chloroplastic 
 ppo-u.5   7460757   ABC transporter B family member 26, chloroplastic 
 mtr-u.5   25497937   ABC transporter B family member 26, chloroplastic 
 mtr-u.5   11407391   ABC transporter B family member 26, chloroplastic 
 sly-u.5   ABCB29   ABC transporter B family member 29 
 osa-u.5   4324312   ABC transporter B family member 26, chloroplastic 
 zma-u.5   103650860   ABC transporter B family member 26, chloroplastic 

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Top 50 coexpressed genes to 107921997 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107921997 (ghi-r.1 coexpression data)

CoexMap"107921997"


ghiLOC107921997 | Entrez gene ID : 107921997    
Species ghi ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna
Paralog 1 1 3 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0055085 [list] [network] transmembrane transport  (2365 genes)  IEA  
GO CC
GO:0009941 [list] [network] chloroplast envelope  (318 genes)  IEA  
GO:0016020 [list] [network] membrane  (8195 genes)  IEA  
GO MF
GO:0140359 [list] [network] ABC-type transporter activity  (244 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (974 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
Protein XP_016707294.1 [sequence] [blastp]
XP_040943314.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  chlo 3,  nucl_plas 3,  golg_plas 3,  cysk_plas 3,  E.R._plas 3,  cyto_plas 3  (predict for XP_016707294.1)
plas 7,  chlo_mito 1,  chlo 1,  mito 1  (predict for XP_040943314.1)
Subcellular
localization
TargetP
mito 7,  chlo 6  (predict for XP_016707294.1)
mito 9  (predict for XP_040943314.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107921997

.
ath-u.5
for
ABCB26

.
gma-u.5
for
100813359

.
gma-u.5
for
100797529

.
gma-u.5
for
100775951

.
vvi-u.5
for
100249410

.
vvi-u.5
for
100247338

.
ppo-u.5
for
7460757

.
mtr-u.5
for
25497937

.
mtr-u.5
for
11407391

.
sly-u.5
for
ABCB29

.
osa-u.5
for
4324312

.
zma-u.5
for
103650860

.


Ortholog ID: 7090
Species ath gma gma sly osa zma bra vvi vvi ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit cit bdi nta nta
Symbol ABCB26 LOC100775951 LOC100813359 ABCB29 LOC4324312 LOC103650860 LOC103830879 LOC100247338 LOC100249410 LOC7460757 LOC11407391 LOC25497937 LOC123080222 LOC123071904 LOC123445168 LOC107892256 LOC107916588 LOC106353797 LOC106446488 CHLRE_16g692300v5 LOC110434016 LOC102596393 LOC102618671 LOC102609116 LOC100832631 LOC107811628 LOC107831222
Function* transporter associated with antigen processing protein 1 ABC transporter B family member 26, chloroplastic ABC transporter B family member 26, chloroplastic ABC transporter B family member 29 ABC transporter B family member 26, chloroplastic ABC transporter B family member 26, chloroplastic ABC transporter B family member 26, chloroplastic ABC transporter B family member 26, chloroplastic ABC transporter B family member 26, chloroplastic ABC transporter B family member 26, chloroplastic ABC transporter B family member 26, chloroplastic ABC transporter B family member 26, chloroplastic ABC transporter B family member 26, chloroplastic ABC transporter B family member 26, chloroplastic ABC transporter B family member 26, chloroplastic ABC transporter B family member 26, chloroplastic ABC transporter B family member 26, chloroplastic ABC transporter B family member 26, chloroplastic ABC transporter B family member 26, chloroplastic uncharacterized protein ABC transporter B family member 26, chloroplastic-like ABC transporter B family member 26, chloroplastic ABC transporter B family member 26, chloroplastic-like ABC transporter B family member 26, chloroplastic ABC transporter B family member 26, chloroplastic ABC transporter B family member 26, chloroplastic ABC transporter B family member 26, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00073 Cutin, suberine and wax biosynthesis 2
gma00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00906 Carotenoid biosynthesis 3
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 2
bra01240 Biosynthesis of cofactors 2
bra00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00920 Sulfur metabolism 3
tae04016 MAPK signaling pathway - plant 3
tae00030 Pentose phosphate pathway 3
tae00040 Pentose and glucuronate interconversions 3
tae00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00030 Pentose phosphate pathway 3
tae00040 Pentose and glucuronate interconversions 3
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00410 beta-Alanine metabolism 2
ghi00640 Propanoate metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 2
bna00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 2
bna00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 3
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 3
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00920 Sulfur metabolism 2
nta00073 Cutin, suberine and wax biosynthesis 2
nta00561 Glycerolipid metabolism 2
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00920 Sulfur metabolism 2
nta00073 Cutin, suberine and wax biosynthesis 2
nta00561 Glycerolipid metabolism 2
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843398 100775951 100813359 101260026 4324312 103650860 103830879 100247338 100249410 7460757 11407391 25497937 123080222 123071904 123445168 107892256 107916588 106353797 106446488 5724899 110434016 102596393 102618671 102609116 100832631 107811628 107831222
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