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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107922171   probable serine/threonine-protein kinase At1g09600 
 ghi-r.1   107894636   probable serine/threonine-protein kinase At1g54610 
 ghi-r.1   107897547   probable serine/threonine-protein kinase At1g54610 
 ghi-r.1   107899141   probable serine/threonine-protein kinase At1g54610 
 ath-u.5   AT5G50860   Protein kinase superfamily protein 
 ath-u.5   AT1G09600   Protein kinase superfamily protein 
 bra-r.6   103838727   probable serine/threonine-protein kinase At1g54610 
 bna-r.1   111215764   probable serine/threonine-protein kinase At1g54610 
 bna-r.1   106452661   probable serine/threonine-protein kinase At1g54610 
 cit-r.1   102612194   probable serine/threonine-protein kinase At1g54610 
 cit-r.1   102613607   probable serine/threonine-protein kinase At1g54610 
 cit-r.1   102616169   probable serine/threonine-protein kinase At1g09600 
 gma-u.5   100790750   probable serine/threonine-protein kinase At1g54610 
 gma-u.5   100789359   probable serine/threonine-protein kinase At1g54610 
 vvi-u.5   100240938   probable serine/threonine-protein kinase At1g54610 
 vvi-u.5   100253772   probable serine/threonine-protein kinase At1g54610 
 vvi-u.5   100264561   probable serine/threonine-protein kinase At1g54610 
 ppo-u.5   18098344   probable serine/threonine-protein kinase At1g09600 
 ppo-u.5   18098892   probable serine/threonine-protein kinase At1g54610 
 mtr-u.5   11446121   probable serine/threonine-protein kinase At1g54610 
 mtr-u.5   11438621   probable serine/threonine-protein kinase At1g54610 
 sly-u.5   101263252   probable serine/threonine-protein kinase At1g09600 
 sly-u.5   101266261   probable serine/threonine-protein kinase At1g54610 
 sly-u.5   101251148   probable serine/threonine-protein kinase At1g09600 
 sot-r.1   102602595   probable serine/threonine-protein kinase At1g54610 
 sot-r.1   102584080   probable serine/threonine-protein kinase At1g09600 
 nta-r.1   107767563   putative serine/threonine-protein kinase At1g54610 
 nta-r.1   107771243   putative serine/threonine-protein kinase At1g09600 
 nta-r.1   107804823   putative serine/threonine-protein kinase At1g54610 
 osa-u.5   107279831   probable serine/threonine-protein kinase At1g09600 
 osa-u.5   4344222   probable serine/threonine-protein kinase At1g54610 
 zma-u.5   100382566   putative protein kinase superfamily protein 
 zma-u.5   100384249   putative protein kinase superfamily protein 
 zma-u.5   103647921   probable serine/threonine-protein kinase At1g54610 
 tae-r.2   123187582   probable serine/threonine-protein kinase At1g54610 
 tae-r.2   123091920   probable serine/threonine-protein kinase At1g54610 
 hvu-r.1   123448665   probable serine/threonine-protein kinase At1g54610 
 hvu-r.1   123397535   probable serine/threonine-protein kinase At1g54610 
 hvu-r.1   123405075   probable serine/threonine-protein kinase At1g54610 
 sbi-r.1   8074412   probable serine/threonine-protein kinase At1g54610 
 sbi-r.1   8075363   probable serine/threonine-protein kinase At1g54610 
 bdi-r.1   100829944   probable serine/threonine-protein kinase At1g09600 
 bdi-r.1   100840851   probable serine/threonine-protein kinase At1g54610 

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Top 50 coexpressed genes to 107922171 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107922171 (ghi-r.1 coexpression data)

CoexMap"107922171"


ghiLOC107922171 | Entrez gene ID : 107922171    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 2 3 2 3 2 2 3 2 3 2 3 2 3 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032968 [list] [network] positive regulation of transcription elongation by RNA polymerase II  (55 genes)  IEA  
GO:0006468 [list] [network] protein phosphorylation  (3020 genes)  IEA  
GO CC
GO:0000307 [list] [network] cyclin-dependent protein kinase holoenzyme complex  (198 genes)  IEA  
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0008353 [list] [network] RNA polymerase II CTD heptapeptide repeat kinase activity  (48 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
Protein XP_016707552.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 1,  cyto 1,  cysk 1,  vacu 1,  pero 1,  chlo_mito 1,  cysk_plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_016707552.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016707552.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107922171
ghi-r.1
for
107894636
ghi-r.1
for
107897547
ghi-r.1
for
107899141
ath-u.5
for
AT5G50860
ath-u.5
for
AT1G09600
bra-r.6
for
103838727
bna-r.1
for
111215764
bna-r.1
for
106452661
cit-r.1
for
102612194
cit-r.1
for
102613607
cit-r.1
for
102616169
gma-u.5
for
100790750
gma-u.5
for
100789359
vvi-u.5
for
100240938
vvi-u.5
for
100253772
vvi-u.5
for
100264561
ppo-u.5
for
18098344
ppo-u.5
for
18098892
mtr-u.5
for
11446121
mtr-u.5
for
11438621
sly-u.5
for
101263252
sly-u.5
for
101266261
sly-u.5
for
101251148
sot-r.1
for
102602595
sot-r.1
for
102584080
nta-r.1
for
107767563
nta-r.1
for
107771243
nta-r.1
for
107804823
osa-u.5
for
107279831
osa-u.5
for
4344222
zma-u.5
for
100382566
zma-u.5
for
100384249
zma-u.5
for
103647921
tae-r.2
for
123187582
tae-r.2
for
123091920
hvu-r.1
for
123448665
hvu-r.1
for
123397535
hvu-r.1
for
123405075
sbi-r.1
for
8074412
sbi-r.1
for
8075363
bdi-r.1
for
100829944
bdi-r.1
for
100840851


Ortholog ID: 331
Species ghi ghi ghi ath ath ath bra bra cit cit cit gma gma vvi vvi ppo mtr mtr sly sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae hvu hvu hvu sbi sbi bdi bdi
Symbol LOC107899141 LOC107893250 LOC107914763 AT5G50860 AT1G09600 AT1G33770 LOC103838727 LOC103864872 LOC102613607 LOC102616169 LOC102625882 LOC100814934 LOC100807756 LOC100240938 LOC100259144 LOC7454750 LOC11446121 LOC11438621 LOC101266261 LOC101251148 LOC101249862 LOC102602595 LOC102584080 LOC102581857 LOC107767563 LOC107771243 LOC107832843 LOC4332836 LOC4325730 LOC100281653 LOC103627303 LOC100193551 LOC123085888 LOC123097110 LOC123448665 LOC123405075 LOC123424803 LOC8075363 LOC8082295 LOC100840851 LOC100842107
Function* probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 Protein kinase superfamily protein Protein kinase superfamily protein Protein kinase superfamily protein probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g09600 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g09600 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g09600 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g09600 probable serine/threonine-protein kinase At1g54610 putative serine/threonine-protein kinase At1g54610 putative serine/threonine-protein kinase At1g09600 putative serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 uncharacterized LOC100281653 probable serine/threonine-protein kinase At1g54610 uncharacterized LOC100193551 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00062 Fatty acid elongation 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 2
ath03410 Base excision repair 2
ath03420 Nucleotide excision repair 2
ath03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04814 Motor proteins 4
cit04145 Phagosome 3
cit04517 IgSF CAM signaling 3
cit00460 Cyanoamino acid metabolism 2
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 4
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00230 Purine metabolism 3
mtr01230 Biosynthesis of amino acids 3
mtr00250 Alanine, aspartate and glutamate metabolism 2
mtr01240 Biosynthesis of cofactors 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta00260 Glycine, serine and threonine metabolism 2
nta00460 Cyanoamino acid metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00051 Fructose and mannose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 3
zma00040 Pentose and glucuronate interconversions 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00513 Various types of N-glycan biosynthesis 2
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03420 Nucleotide excision repair 2
sbi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107899141 107893250 107914763 835158 837487 840268 103838727 103864872 102613607 102616169 102625882 100814934 100807756 100240938 100259144 7454750 11446121 11438621 101266261 101251148 101249862 102602595 102584080 102581857 107767563 107771243 107832843 4332836 4325730 100281653 103627303 100193551 123085888 123097110 123448665 123405075 123424803 8075363 8082295 100840851 100842107
The preparation time of this page was 4.9 [sec].