Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107922821   U-box domain-containing protein 3 
 ghi-r.1   107958645   U-box domain-containing protein 3 
 ghi-r.1   107955431   U-box domain-containing protein 3 
 ghi-r.1   107954637   U-box domain-containing protein 3 
 ath-u.5   AT3G54790   ARM repeat superfamily protein 
 bra-r.6   103841380   U-box domain-containing protein 3 
 bna-r.1   106445426   U-box domain-containing protein 3-like 
 bna-r.1   106411704   U-box domain-containing protein 3 
 bna-r.1   106411575   U-box domain-containing protein 3-like 
 cit-r.1   102612575   U-box domain-containing protein 3 
 gma-u.5   100804684   U-box domain-containing protein 3 
 gma-u.5   100800949   U-box domain and armadillo/beta-catenin repeat-containing protein 
 gma-u.5   100782215   U-box domain-containing protein 3 
 vvi-u.5   100266964   U-box domain-containing protein 3 
 ppo-u.5   7471963   U-box domain-containing protein 3 
 ppo-u.5   7476923   U-box domain-containing protein 3 
 mtr-u.5   25484253   U-box domain-containing protein 3 
 mtr-u.5   25499269   U-box domain-containing protein 3 
 sly-u.5   101260859   U-box domain-containing protein 3 
 sot-r.1   102596908   U-box domain-containing protein 3 
 nta-r.1   107779205   U-box domain-containing protein 3-like 
 nta-r.1   107790889   U-box domain-containing protein 3-like 

close


Top 50 coexpressed genes to 107922821 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107922821 (ghi-r.1 coexpression data)

CoexMap"107922821"


ghiLOC107922821 | Entrez gene ID : 107922821    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta bdi osa tae zma cre sbi hvu
Paralog 4 1 1 3 1 3 1 2 2 1 1 2 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (962 genes)  IEA  
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (871 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016708489.2 [sequence] [blastp]
XP_040962073.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 3,  chlo_mito 3  (predict for XP_016708489.2)
chlo 5,  nucl 4,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_040962073.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_016708489.2)
other 6  (predict for XP_040962073.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107922821
ghi-r.1
for
107958645
ghi-r.1
for
107955431
ghi-r.1
for
107954637
ath-u.5
for
AT3G54790
bra-r.6
for
103841380
bna-r.1
for
106445426
bna-r.1
for
106411704
bna-r.1
for
106411575
cit-r.1
for
102612575
gma-u.5
for
100804684
gma-u.5
for
100800949
gma-u.5
for
100782215
vvi-u.5
for
100266964
ppo-u.5
for
7471963
ppo-u.5
for
7476923
mtr-u.5
for
25484253
mtr-u.5
for
25499269
sly-u.5
for
101260859
sot-r.1
for
102596908
nta-r.1
for
107779205
nta-r.1
for
107790889


Ortholog ID: 8984
Species ghi ghi ghi ath bra bna bna bna cit gma gma gma vvi ppo ppo mtr mtr sly sot nta nta
Symbol LOC107922821 LOC107958645 LOC107923879 AT3G54790 LOC103841380 LOC106445426 LOC106411575 LOC125608091 LOC102612575 LOC100804684 LOC100800949 LOC100782215 LOC100266964 LOC7471963 LOC7476923 LOC25484253 LOC25499269 LOC101260859 LOC102596908 LOC107779205 LOC107790889
Function* U-box domain-containing protein 3 U-box domain-containing protein 3 U-box domain-containing protein 3 ARM repeat superfamily protein U-box domain-containing protein 3 U-box domain-containing protein 3-like U-box domain-containing protein 3-like U-box domain-containing protein 3-like U-box domain-containing protein 3 U-box domain-containing protein 3 U-box domain and armadillo/beta-catenin repeat-containing protein U-box domain-containing protein 3 U-box domain-containing protein 3 U-box domain-containing protein 3 U-box domain-containing protein 3 U-box domain-containing protein 3 U-box domain-containing protein 3 U-box domain-containing protein 3 U-box domain-containing protein 3 U-box domain-containing protein 3-like U-box domain-containing protein 3-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00561 Glycerolipid metabolism 2
bna00564 Glycerophospholipid metabolism 2
bna04070 Phosphatidylinositol signaling system 2
bna00062 Fatty acid elongation 2
bna01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
mtr04145 Phagosome 2
mtr04517 IgSF CAM signaling 2
mtr04814 Motor proteins 2
mtr02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107922821 107958645 107923879 824644 103841380 106445426 106411575 125608091 102612575 100804684 100800949 100782215 100266964 7471963 7476923 25484253 25499269 101260859 102596908 107779205 107790889
The preparation time of this page was 0.1 [sec].