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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107922831   THO complex subunit 3 
 ghi-r.1   107924919   uncharacterized LOC107924919 
 ghi-r.1   121222304   uncharacterized LOC121222304 
 ghi-r.1   107915372   uncharacterized LOC107915372 
 ath-u.5   AT2G31130   uncharacterized protein 
 bra-r.6   103857362   uncharacterized LOC103857362 
 bra-r.6   103865105   uncharacterized LOC103865105 
 bra-r.6   103867913   uncharacterized LOC103867913 
 bna-r.1   BNAA05G11610D   uncharacterized BNAA05G11610D 
 bna-r.1   125575061   uncharacterized LOC125575061 
 cit-r.1   102611541   uncharacterized LOC102611541 
 gma-u.5   100793952   uncharacterized LOC100793952 
 gma-u.5   100787752   uncharacterized LOC100787752 
 gma-u.5   100778543   uncharacterized LOC100778543 
 vvi-u.5   100250516   uncharacterized LOC100250516 
 ppo-u.5   7494597   uncharacterized LOC7494597 
 ppo-u.5   18104509   uncharacterized LOC18104509 
 mtr-u.5   11408455   uncharacterized LOC11408455 
 mtr-u.5   25487773   uncharacterized LOC25487773 
 sly-u.5   101260247   uncharacterized LOC101260247 
 sly-u.5   101256948   uncharacterized LOC101256948 
 sot-r.1   102601397   uncharacterized LOC102601397 
 sot-r.1   102594335   uncharacterized LOC102594335 
 nta-r.1   107812513   uncharacterized LOC107812513 
 nta-r.1   107797302   uncharacterized LOC107797302 
 nta-r.1   107775144   uncharacterized LOC107775144 

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Top 50 coexpressed genes to 107922831 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107922831 (ghi-r.1 coexpression data)

CoexMap"107922831"


ghiLOC107922831 | Entrez gene ID : 107922831    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta bdi osa tae zma cre sbi hvu
Paralog 4 1 3 2 1 3 1 2 2 2 2 3 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006406 [list] [network] mRNA export from nucleus  (78 genes)  IEA  
GO CC
GO:0000445 [list] [network] THO complex part of transcription export complex  (11 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_040954204.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 2  (predict for XP_040954204.1)
Subcellular
localization
TargetP
chlo 6,  other 5  (predict for XP_040954204.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107922831
ghi-r.1
for
107924919
ghi-r.1
for
121222304
ghi-r.1
for
107915372
ath-u.5
for
AT2G31130
bra-r.6
for
103857362
bra-r.6
for
103865105
bra-r.6
for
103867913
bna-r.1
for
BNAA05G11610D
bna-r.1
for
125575061
cit-r.1
for
102611541
gma-u.5
for
100793952
gma-u.5
for
100787752
gma-u.5
for
100778543
vvi-u.5
for
100250516
ppo-u.5
for
7494597
ppo-u.5
for
18104509
mtr-u.5
for
11408455
mtr-u.5
for
25487773
sly-u.5
for
101260247
sly-u.5
for
101256948
sot-r.1
for
102601397
sot-r.1
for
102594335
nta-r.1
for
107812513
nta-r.1
for
107797302
nta-r.1
for
107775144


Ortholog ID: 6231
Species ghi ghi ghi ath bra bra bra bna bna cit gma gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta nta
Symbol LOC107922831 LOC107915372 LOC107896858 AT2G31130 LOC103857362 LOC103865105 LOC103867913 BNAA05G11610D LOC125575061 LOC102611541 LOC100793952 LOC100787752 LOC100778543 LOC100250516 LOC7494597 LOC18104509 LOC11408455 LOC25487773 LOC101260247 LOC101256948 LOC102601397 LOC102594335 LOC107812513 LOC107797302 LOC107763969
Function* THO complex subunit 3 uncharacterized LOC107915372 uncharacterized LOC107896858 uncharacterized protein uncharacterized LOC103857362 uncharacterized LOC103865105 uncharacterized LOC103867913 uncharacterized BNAA05G11610D uncharacterized LOC125575061 uncharacterized LOC102611541 uncharacterized LOC100793952 uncharacterized LOC100787752 uncharacterized LOC100778543 uncharacterized LOC100250516 uncharacterized LOC7494597 uncharacterized LOC18104509 uncharacterized LOC11408455 uncharacterized LOC25487773 uncharacterized LOC101260247 uncharacterized LOC101256948 uncharacterized LOC102601397 uncharacterized LOC102594335 uncharacterized LOC107812513 uncharacterized LOC107797302 uncharacterized LOC107763969
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00290 Valine, leucine and isoleucine biosynthesis 2
ghi00660 C5-Branched dibasic acid metabolism 2
ghi00966 Glucosinolate biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04146 Peroxisome 2
ath04075 Plant hormone signal transduction 2
ath00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00010 Glycolysis / Gluconeogenesis 2
bra00030 Pentose phosphate pathway 2
bra00051 Fructose and mannose metabolism 2
bra00052 Galactose metabolism 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00640 Propanoate metabolism 2
cit01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 4
gma00620 Pyruvate metabolism 3
gma00010 Glycolysis / Gluconeogenesis 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 3
gma04136 Autophagy - other 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 4
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
nta00230 Purine metabolism 2
nta00232 Caffeine metabolism 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
nta00230 Purine metabolism 2
nta00232 Caffeine metabolism 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 4
nta04075 Plant hormone signal transduction 4
nta00250 Alanine, aspartate and glutamate metabolism 2
nta00260 Glycine, serine and threonine metabolism 2
nta00270 Cysteine and methionine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107922831 107915372 107896858 817669 103857362 103865105 103867913 106451372 125575061 102611541 100793952 100787752 100778543 100250516 7494597 18104509 11408455 25487773 101260247 101256948 102601397 102594335 107812513 107797302 107763969
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