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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107910080   F-box protein CPR1 
 ath-u.5   AT3G06240   F-box family protein 
 ath-u.5   AT3G07870   F-box and associated interaction domains-containing protein 
 ath-u.5   AT3G23880   F-box and associated interaction domains-containing protein 
 bra-r.6   103859144   F-box/kelch-repeat protein At3g06240 
 bna-r.1   125594169   F-box protein At4g22390-like 
 bna-r.1   111206595   F-box protein CPR1-like 
 cit-r.1   102606753   F-box protein At3g07870-like 
 cit-r.1   102625852   F-box protein CPR1 
 gma-u.5   102666785   F-box/kelch-repeat protein At3g17530 
 ppo-u.5   7455978   F-box protein At3g07870 
 ppo-u.5   7455824   F-box protein CPR1 
 sly-u.5   101267558   F-box/F-box associated protein 
 sot-r.1   102605926   F-box/kelch-repeat protein At3g23880 
 sot-r.1   102596989   F-box protein CPR30-like 
 nta-r.1   107775756   F-box protein CPR1-like 
 nta-r.1   107784091   F-box protein CPR1-like 
 bdi-r.1   100823474   F-box/LRR-repeat protein At2g43260 

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Top 50 coexpressed genes to 107910080 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107910080 (ghi-r.1 coexpression data)

CoexMap"107923408"


ghiLOC107923408 | Entrez gene ID : 107923408    
Species ghi ath bra bna cit gma ppo sly sot nta bdi osa vvi tae zma mtr sbi hvu cre
Paralog 1 3 1 2 2 1 2 1 2 2 1 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016709108.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 3,  nucl 2,  chlo 1,  cysk_nucl 1,  nucl_plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_016709108.2)
Subcellular
localization
TargetP
other 3  (predict for XP_016709108.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107910080
ath-u.5
for
AT3G06240
ath-u.5
for
AT3G07870
ath-u.5
for
AT3G23880
bra-r.6
for
103859144
bna-r.1
for
125594169
bna-r.1
for
111206595
cit-r.1
for
102606753
cit-r.1
for
102625852
gma-u.5
for
102666785
ppo-u.5
for
7455978
ppo-u.5
for
7455824
sly-u.5
for
101267558
sot-r.1
for
102605926
sot-r.1
for
102596989
nta-r.1
for
107775756
nta-r.1
for
107784091
bdi-r.1
for
100823474


Ortholog ID: 25
Species ghi ghi ath ath bra bna gma gma gma vvi mtr mtr sly sot nta nta nta bdi
Symbol LOC107888906 LOC107920139 AT3G06240 AT3G07870 LOC103859247 LOC106388992 LOC100809732 LOC100789763 LOC100789250 LOC100253229 LOC11407622 LOC25483269 LOC101244418 LOC107062273 LOC107824897 LOC107792385 LOC107793667 LOC100823474
Function* F-box/kelch-repeat protein At3g06240 F-box/kelch-repeat protein At3g23880 F-box family protein F-box and associated interaction domains-containing protein F-box protein At3g07870 F-box protein At3g07870-like F-box/kelch-repeat protein At3g06240 F-box protein CPR1 putative F-box protein F-box protein CPR1 F-box/kelch-repeat protein At3g23880 F-box/kelch-repeat protein At3g23880 F-box/kelch-repeat protein At3g23880-like F-box/kelch-repeat protein At3g06240-like F-box/kelch-repeat protein At3g23880 F-box/kelch-repeat protein At3g23880-like F-box/kelch-repeat protein At3g23880-like F-box/LRR-repeat protein At2g43260
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 4
bna00480 Glutathione metabolism 2
bna00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 4
nta03430 Mismatch repair 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107888906 107920139 819798 819978 103859247 106388992 100809732 100789763 100789250 100253229 11407622 25483269 101244418 107062273 107824897 107792385 107793667 100823474
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