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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107923837   trafficking protein particle complex subunit 1 
 ghi-r.1   107904585   trafficking protein particle complex subunit 1 
 ath-u.5   AT1G51160   SNARE-like superfamily protein 
 bra-r.6   103832847   trafficking protein particle complex subunit 1 
 bra-r.6   103871297   trafficking protein particle complex subunit 1 
 bna-r.1   106435343   trafficking protein particle complex subunit 1 
 bna-r.1   106427445   trafficking protein particle complex subunit 1 
 bna-r.1   106359488   trafficking protein particle complex subunit 1 
 cit-r.1   102623215   uncharacterized LOC102623215 
 gma-u.5   100819825   sybindin-like family protein 
 gma-u.5   100814071   trafficking protein particle complex subunit 1-like 
 vvi-u.5   100243588   uncharacterized LOC100243588 
 vvi-u.5   100266422   uncharacterized LOC100266422 
 ppo-u.5   18106437   uncharacterized LOC18106437 
 mtr-u.5   25492143   trafficking protein particle complex subunit 1 
 mtr-u.5   11437534   trafficking protein particle complex subunit 1 
 sly-u.5   101258922   trafficking protein particle complex subunit 1-like 
 sot-r.1   102598913   trafficking protein particle complex subunit 1 
 nta-r.1   107771970   uncharacterized LOC107771970 
 nta-r.1   107784262   uncharacterized LOC107784262 
 osa-u.5   4323988   trafficking protein particle complex subunit 1 
 zma-u.5   100284041   uncharacterized LOC100284041 
 zma-u.5   100192032   Trafficking protein particle complex subunit 1 
 tae-r.2   123069321   trafficking protein particle complex subunit 1 
 tae-r.2   123060764   trafficking protein particle complex subunit 1 
 tae-r.2   123077842   trafficking protein particle complex subunit 1 
 hvu-r.1   123448259   trafficking protein particle complex subunit 1 
 sbi-r.1   8056756   trafficking protein particle complex subunit 1 
 bdi-r.1   100825282   trafficking protein particle complex subunit 1 
 cre-r.1   CHLRE_06g289700v5   uncharacterized protein 

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Top 50 coexpressed genes to 107923837 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107923837 (ghi-r.1 coexpression data)

CoexMap"107923837"


ghiLOC107923837 | Entrez gene ID : 107923837    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 2 3 1 2 2 1 2 1 1 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006888 [list] [network] endoplasmic reticulum to Golgi vesicle-mediated transport  (272 genes)  IEA  
GO CC
GO:0030008 [list] [network] TRAPP complex  (43 genes)  IEA  
GO MF
Protein XP_016709471.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 2  (predict for XP_016709471.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for XP_016709471.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107923837
ghi-r.1
for
107904585
ath-u.5
for
AT1G51160
bra-r.6
for
103832847
bra-r.6
for
103871297
bna-r.1
for
106435343
bna-r.1
for
106427445
bna-r.1
for
106359488
cit-r.1
for
102623215
gma-u.5
for
100819825
gma-u.5
for
100814071
vvi-u.5
for
100243588
vvi-u.5
for
100266422
ppo-u.5
for
18106437
mtr-u.5
for
25492143
mtr-u.5
for
11437534
sly-u.5
for
101258922
sot-r.1
for
102598913
nta-r.1
for
107771970
nta-r.1
for
107784262
osa-u.5
for
4323988
zma-u.5
for
100284041
zma-u.5
for
100192032
tae-r.2
for
123069321
tae-r.2
for
123060764
tae-r.2
for
123077842
hvu-r.1
for
123448259
sbi-r.1
for
8056756
bdi-r.1
for
100825282
cre-r.1
for
CHLRE_06g289700v5


Ortholog ID: 7068
Species ghi ghi ath bra bra bna bna bna cit gma gma vvi vvi ppo mtr mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC107923837 LOC107904585 AT1G51160 LOC103832847 LOC103871297 LOC106435343 LOC106427445 LOC125577251 LOC102623215 LOC100819825 LOC100814071 LOC100243588 LOC100266422 LOC18106437 LOC25492143 LOC11437534 LOC101258922 LOC102598913 LOC107771970 LOC107784262 LOC4323988 LOC100284041 LOC100192032 LOC123069321 LOC123060764 LOC123077842 LOC123448259 LOC8056756 LOC100825282 CHLRE_06g289700v5
Function* trafficking protein particle complex subunit 1 trafficking protein particle complex subunit 1 SNARE-like superfamily protein trafficking protein particle complex subunit 1 trafficking protein particle complex subunit 1 trafficking protein particle complex subunit 1 trafficking protein particle complex subunit 1 trafficking protein particle complex subunit 1-like uncharacterized LOC102623215 sybindin-like family protein trafficking protein particle complex subunit 1-like uncharacterized LOC100243588 uncharacterized LOC100266422 uncharacterized LOC18106437 trafficking protein particle complex subunit 1 trafficking protein particle complex subunit 1 trafficking protein particle complex subunit 1-like trafficking protein particle complex subunit 1 uncharacterized LOC107771970 uncharacterized LOC107784262 trafficking protein particle complex subunit 1 uncharacterized LOC100284041 Trafficking protein particle complex subunit 1 trafficking protein particle complex subunit 1 trafficking protein particle complex subunit 1 trafficking protein particle complex subunit 1 trafficking protein particle complex subunit 1 trafficking protein particle complex subunit 1 trafficking protein particle complex subunit 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 4
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 6
bra04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit00970 Aminoacyl-tRNA biosynthesis 3
cit00190 Oxidative phosphorylation 2
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03015 mRNA surveillance pathway 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
vvi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 2
ppo04145 Phagosome 2
ppo03010 Ribosome 2
ppo00510 N-Glycan biosynthesis 2
ppo00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00600 Sphingolipid metabolism 2
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 6
sot04145 Phagosome 4
sot04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 4
nta00670 One carbon pool by folate 3
nta00020 Citrate cycle (TCA cycle) 2
nta04141 Protein processing in endoplasmic reticulum 2
nta00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta00020 Citrate cycle (TCA cycle) 2
nta04141 Protein processing in endoplasmic reticulum 2
nta00190 Oxidative phosphorylation 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 2
zma03040 Spliceosome 2
zma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 4
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 4
tae04130 SNARE interactions in vesicular transport 4
tae04141 Protein processing in endoplasmic reticulum 2
tae04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae04141 Protein processing in endoplasmic reticulum 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00510 N-Glycan biosynthesis 3
hvu00513 Various types of N-glycan biosynthesis 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 2
cre04145 Phagosome 2
cre04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107923837 107904585 841539 103832847 103871297 106435343 106427445 125577251 102623215 100819825 100814071 100243588 100266422 18106437 25492143 11437534 101258922 102598913 107771970 107784262 4323988 100284041 100192032 123069321 123060764 123077842 123448259 8056756 100825282 5721072
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