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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107923893   uncharacterized LOC107923893 
 ghi-r.1   107929473   zinc finger protein CONSTANS-LIKE 9 
 ghi-r.1   107947246   zinc finger protein CONSTANS-LIKE 9 
 ghi-r.1   107937638   uncharacterized LOC107937638 
 ath-u.5   AT4G27900   CCT motif family protein 
 ath-u.5   AT5G53420   CCT motif family protein 
 bra-r.6   103852031   zinc finger protein CONSTANS-LIKE 10 
 bra-r.6   103844818   putative zinc finger protein CONSTANS-LIKE 11 
 bra-r.6   103834787   zinc finger protein CONSTANS-LIKE 16 
 bna-r.1   106416262   zinc finger protein CONSTANS-LIKE 3 
 bna-r.1   106416437   putative zinc finger protein CONSTANS-LIKE 11 
 bna-r.1   106375707   zinc finger protein HD1-like 
 cit-r.1   102616889   zinc finger protein CONSTANS-LIKE 1 
 gma-u.5   100814332   CCT motif-containing protein 
 gma-u.5   100820570   CCT motif-containing protein 
 vvi-u.5   100241849   zinc finger protein CONSTANS-LIKE 1 
 ppo-u.5   7464259   uncharacterized LOC7464259 
 ppo-u.5   7464549   uncharacterized LOC7464549 
 mtr-u.5   11434187   zinc finger protein CONSTANS-LIKE 12 
 mtr-u.5   11446456   uncharacterized LOC11446456 
 sly-u.5   101255179   zinc finger protein CO3 
 sot-r.1   102578992   uncharacterized LOC102578992 
 nta-r.1   107795859   zinc finger protein CONSTANS-LIKE 1 
 nta-r.1   107829604   uncharacterized LOC107829604 
 osa-u.5   4339814   uncharacterized LOC4339814 
 zma-u.5   100285500   uncharacterized LOC100285500 
 zma-u.5   100382313   CCT motif family protein 
 zma-u.5   103646403   zinc finger protein CONSTANS-LIKE 1 
 tae-r.2   123071108   uncharacterized LOC123071108 
 tae-r.2   123102023   GATA transcription factor 20-like 
 tae-r.2   123183648   uncharacterized LOC123183648 
 hvu-r.1   123452856   GATA transcription factor 20-like 
 hvu-r.1   123452846   uncharacterized LOC123452846 
 sbi-r.1   8065341   uncharacterized LOC8065341 
 bdi-r.1   100837783   zinc finger protein CONSTANS-LIKE 2 

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Top 50 coexpressed genes to 107923893 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107923893 (ghi-r.1 coexpression data)

CoexMap"107923893"


ghiLOC107923893 | Entrez gene ID : 107923893    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 1 2 1 2 2 1 1 2 1 3 3 2 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009909 [list] [network] regulation of flower development  (72 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016709556.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 1,  extr 1  (predict for XP_016709556.1)
Subcellular
localization
TargetP
other 7  (predict for XP_016709556.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107923893
ghi-r.1
for
107929473
ghi-r.1
for
107947246
ghi-r.1
for
107937638
ath-u.5
for
AT4G27900
ath-u.5
for
AT5G53420
bra-r.6
for
103852031
bra-r.6
for
103844818
bra-r.6
for
103834787
bna-r.1
for
106416262
bna-r.1
for
106416437
bna-r.1
for
106375707
cit-r.1
for
102616889
gma-u.5
for
100814332
gma-u.5
for
100820570
vvi-u.5
for
100241849
ppo-u.5
for
7464259
ppo-u.5
for
7464549
mtr-u.5
for
11434187
mtr-u.5
for
11446456
sly-u.5
for
101255179
sot-r.1
for
102578992
nta-r.1
for
107795859
nta-r.1
for
107829604
osa-u.5
for
4339814
zma-u.5
for
100285500
zma-u.5
for
100382313
zma-u.5
for
103646403
tae-r.2
for
123071108
tae-r.2
for
123102023
tae-r.2
for
123183648
hvu-r.1
for
123452856
hvu-r.1
for
123452846
sbi-r.1
for
8065341
bdi-r.1
for
100837783


Ortholog ID: 3366
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit gma gma vvi ppo ppo mtr mtr sly sot nta nta osa zma zma zma tae tae tae hvu hvu sbi bdi
Symbol LOC107937638 LOC107915137 LOC107904572 AT4G27900 AT5G53420 LOC103844818 LOC103834787 LOC103857081 LOC106416437 LOC106375707 LOC106390599 LOC102616889 LOC100814332 LOC100820570 LOC100241849 LOC7464259 LOC7464549 LOC11434187 LOC11446456 LOC101255179 LOC102578992 LOC107795859 LOC107829604 LOC4339814 LOC100285500 LOC100382313 LOC103642519 LOC123102023 LOC123183648 LOC123183430 LOC123452856 LOC123452846 LOC8065341 LOC100837783
Function* uncharacterized LOC107937638 uncharacterized LOC107915137 uncharacterized LOC107904572 CCT motif family protein CCT motif family protein putative zinc finger protein CONSTANS-LIKE 11 zinc finger protein CONSTANS-LIKE 16 zinc finger protein CONSTANS-LIKE 9 putative zinc finger protein CONSTANS-LIKE 11 zinc finger protein HD1-like zinc finger protein CONSTANS-LIKE 10-like zinc finger protein CONSTANS-LIKE 1 CCT motif-containing protein CCT motif-containing protein zinc finger protein CONSTANS-LIKE 1 uncharacterized LOC7464259 uncharacterized LOC7464549 zinc finger protein CONSTANS-LIKE 12 uncharacterized LOC11446456 zinc finger protein CO3 uncharacterized LOC102578992 zinc finger protein CONSTANS-LIKE 1 uncharacterized LOC107829604 uncharacterized LOC4339814 uncharacterized LOC100285500 CCT motif family protein uncharacterized LOC103642519 GATA transcription factor 20-like uncharacterized LOC123183648 uncharacterized LOC123183430 GATA transcription factor 20-like uncharacterized LOC123452846 uncharacterized LOC8065341 zinc finger protein CONSTANS-LIKE 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00941 Flavonoid biosynthesis 2
ghi00944 Flavone and flavonol biosynthesis 2
ghi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
ghi00905 Brassinosteroid biosynthesis 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 4
ath04016 MAPK signaling pathway - plant 3
ath00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 7
ath00520 Amino sugar and nucleotide sugar metabolism 2
ath01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 3
gma04146 Peroxisome 3
gma03272 Virion - Hepatitis viruses 2
gma00071 Fatty acid degradation 2
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
ppo00030 Pentose phosphate pathway 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00905 Brassinosteroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
sly00520 Amino sugar and nucleotide sugar metabolism 2
sly01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 7
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00460 Cyanoamino acid metabolism 2
nta00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 5
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00020 Citrate cycle (TCA cycle) 2
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107937638 107915137 107904572 828903 835423 103844818 103834787 103857081 106416437 106375707 106390599 102616889 100814332 100820570 100241849 7464259 7464549 11434187 11446456 101255179 102578992 107795859 107829604 4339814 100285500 100382313 103642519 123102023 123183648 123183430 123452856 123452846 8065341 100837783
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