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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107924544   ribosome-recycling factor, chloroplastic 
 ghi-r.1   107912437   ribosome-recycling factor, chloroplastic 
 ath-u.5   RRF   ribosome recycling factor, chloroplast precursor 
 bra-r.6   103862752   ribosome-recycling factor, chloroplastic 
 bra-r.6   103842119   ribosome-recycling factor, chloroplastic 
 bna-r.1   106396736   ribosome-recycling factor, chloroplastic 
 bna-r.1   106411753   ribosome-recycling factor, chloroplastic 
 bna-r.1   106444941   ribosome-recycling factor, chloroplastic 
 cit-r.1   102612875   ribosome-recycling factor, chloroplastic 
 gma-u.5   100794560   ribosome-recycling factor, chloroplastic-like 
 vvi-u.5   100263214   ribosome-recycling factor, chloroplastic 
 ppo-u.5   7480695   ribosome-recycling factor, chloroplastic 
 mtr-u.5   11429564   ribosome-recycling factor, chloroplastic 
 sly-u.5   101257700   ribosome-recycling factor, chloroplastic 
 sot-r.1   102588362   ribosome-recycling factor, chloroplastic 
 nta-r.1   107778986   ribosome-recycling factor, chloroplastic 
 nta-r.1   107825140   ribosome-recycling factor, chloroplastic 
 osa-u.5   4343662   ribosome-recycling factor, chloroplastic 
 zma-u.5   100284109   ribosome recycling factor 
 zma-u.5   100217177   Ribosome-recycling factor chloroplastic 
 tae-r.2   123052350   ribosome-recycling factor, chloroplastic 
 tae-r.2   123044486   ribosome-recycling factor, chloroplastic 
 tae-r.2   123188195   ribosome-recycling factor, chloroplastic 
 hvu-r.1   123425633   ribosome-recycling factor, chloroplastic 
 sbi-r.1   8066076   ribosome-recycling factor, chloroplastic 
 bdi-r.1   100834081   ribosome-recycling factor, chloroplastic 
 cre-r.1   CHLRE_03g156050v5   uncharacterized protein 

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Top 50 coexpressed genes to 107924544 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107924544 (ghi-r.1 coexpression data)

CoexMap"107924544"


ghiLOC107924544 | Entrez gene ID : 107924544    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 2 3 1 1 1 1 1 1 1 2 1 2 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032544 [list] [network] plastid translation  (15 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1647 genes)  IEA  
GO MF
GO:0043023 [list] [network] ribosomal large subunit binding  (19 genes)  IEA  
Protein XP_016710530.1 [sequence] [blastp]
XP_040937058.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 2,  pero 1,  E.R._vacu 1  (predict for XP_016710530.1)
chlo 6,  mito 3  (predict for XP_040937058.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_016710530.1)
chlo 8  (predict for XP_040937058.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107924544
ghi-r.1
for
107912437
ath-u.5
for
RRF
bra-r.6
for
103862752
bra-r.6
for
103842119
bna-r.1
for
106396736
bna-r.1
for
106411753
bna-r.1
for
106444941
cit-r.1
for
102612875
gma-u.5
for
100794560
vvi-u.5
for
100263214
ppo-u.5
for
7480695
mtr-u.5
for
11429564
sly-u.5
for
101257700
sot-r.1
for
102588362
nta-r.1
for
107778986
nta-r.1
for
107825140
osa-u.5
for
4343662
zma-u.5
for
100284109
zma-u.5
for
100217177
tae-r.2
for
123052350
tae-r.2
for
123044486
tae-r.2
for
123188195
hvu-r.1
for
123425633
sbi-r.1
for
8066076
bdi-r.1
for
100834081
cre-r.1
for
CHLRE_03g156050v5


Ortholog ID: 8522
Species ghi ghi ath bra bra bna bna bna cit gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC107924544 LOC107912437 RRF LOC103862752 LOC103842119 LOC106396736 LOC106444941 LOC111200771 LOC102612875 LOC100794560 LOC100263214 LOC7480695 LOC11429564 LOC101257700 LOC102588362 LOC107778986 LOC107825140 LOC4343662 LOC100284109 LOC100217177 LOC123052350 LOC123044486 LOC123188195 LOC123425633 LOC8066076 LOC100834081 CHLRE_03g156050v5
Function* ribosome-recycling factor, chloroplastic ribosome-recycling factor, chloroplastic ribosome recycling factor, chloroplast precursor ribosome-recycling factor, chloroplastic ribosome-recycling factor, chloroplastic ribosome-recycling factor, chloroplastic ribosome-recycling factor, chloroplastic ribosome-recycling factor, chloroplastic ribosome-recycling factor, chloroplastic ribosome-recycling factor, chloroplastic-like ribosome-recycling factor, chloroplastic ribosome-recycling factor, chloroplastic ribosome-recycling factor, chloroplastic ribosome-recycling factor, chloroplastic ribosome-recycling factor, chloroplastic ribosome-recycling factor, chloroplastic ribosome-recycling factor, chloroplastic ribosome-recycling factor, chloroplastic ribosome recycling factor Ribosome-recycling factor chloroplastic ribosome-recycling factor, chloroplastic ribosome-recycling factor, chloroplastic ribosome-recycling factor, chloroplastic ribosome-recycling factor, chloroplastic ribosome-recycling factor, chloroplastic ribosome-recycling factor, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
ghi00910 Nitrogen metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 2
bna04141 Protein processing in endoplasmic reticulum 2
bna04145 Phagosome 2
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
gma00010 Glycolysis / Gluconeogenesis 2
gma00051 Fructose and mannose metabolism 2
gma00562 Inositol phosphate metabolism 2
gma00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 9
sot00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta00010 Glycolysis / Gluconeogenesis 2
nta00020 Citrate cycle (TCA cycle) 2
nta00260 Glycine, serine and threonine metabolism 2
nta00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00010 Glycolysis / Gluconeogenesis 2
nta00020 Citrate cycle (TCA cycle) 2
nta00260 Glycine, serine and threonine metabolism 2
nta00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
tae01240 Biosynthesis of cofactors 5
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 13
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 13
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 9
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 11
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107924544 107912437 825494 103862752 103842119 106396736 106444941 111200771 102612875 100794560 100263214 7480695 11429564 101257700 102588362 107778986 107825140 4343662 100284109 100217177 123052350 123044486 123188195 123425633 8066076 100834081 5723055
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