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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107924701   50S ribosomal protein L11, chloroplastic 
 ath-u.5   PRPL11   plastid ribosomal protein l11 
 gma-u.5   100306424   uncharacterized LOC100306424 
 vvi-u.5   100263279   large ribosomal subunit protein uL11c 
 ppo-u.5   7490712   50S ribosomal protein L11, chloroplastic 
 ppo-u.5   18103455   50S ribosomal protein L11, chloroplastic 
 mtr-u.5   11433227   50S ribosomal protein L11, chloroplastic 
 sly-u.5   101259181   uncharacterized LOC101259181 
 osa-u.5   4331442   uncharacterized LOC4331442 
 zma-u.5   100285173   50S ribosomal protein L11, chloroplastic-like 

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Top 50 coexpressed genes to 107924701 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107924701 (ghi-r.1 coexpression data)

CoexMap"107924701"


ghiLOC107924701 | Entrez gene ID : 107924701    
Species ghi ath gma vvi ppo mtr sly osa zma cre cit hvu bdi sot bra sbi tae nta bna
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0005762 [list] [network] mitochondrial large ribosomal subunit  (54 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0070180 [list] [network] large ribosomal subunit rRNA binding  (39 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_016710748.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  cyto 1,  mito 1,  cyto_nucl 1  (predict for XP_016710748.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016710748.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107924701

.
ath-u.5
for
PRPL11

.
gma-u.5
for
100306424

.
vvi-u.5
for
100263279

.
ppo-u.5
for
7490712

.
ppo-u.5
for
18103455

.
mtr-u.5
for
11433227

.
sly-u.5
for
101259181

.
osa-u.5
for
4331442

.
zma-u.5
for
100285173

.


Ortholog ID: 9161
Species ath gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol PRPL11 LOC100306424 LOC101259181 LOC4331442 LOC100285173 LOC103840120 LOC100263279 LOC7490712 LOC18103455 LOC11433227 LOC123093770 LOC123099005 LOC123449880 LOC107904533 LOC107924701 LOC106418758 LOC106367099 CHLRE_10g423650v5 LOC8085722 LOC102582361 LOC102624880 LOC100841775 LOC107815549 LOC107817411
Function* plastid ribosomal protein l11 uncharacterized LOC100306424 uncharacterized LOC101259181 uncharacterized LOC4331442 50S ribosomal protein L11, chloroplastic-like 50S ribosomal protein L11, chloroplastic large ribosomal subunit protein uL11c 50S ribosomal protein L11, chloroplastic 50S ribosomal protein L11, chloroplastic 50S ribosomal protein L11, chloroplastic 50S ribosomal protein L11, chloroplastic 50S ribosomal protein L11, chloroplastic 50S ribosomal protein L11, chloroplastic 50S ribosomal protein L11, chloroplastic 50S ribosomal protein L11, chloroplastic 50S ribosomal protein L11, chloroplastic-like 50S ribosomal protein L11, chloroplastic uncharacterized protein 50S ribosomal protein L11 50S ribosomal protein L11 50S ribosomal protein L11, chloroplastic 50S ribosomal protein L11, chloroplastic large ribosomal subunit protein uL11c large ribosomal subunit protein uL11c
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
bra00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae01240 Biosynthesis of cofactors 3
tae00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 11
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 840194 100306424 101259181 4331442 100285173 103840120 100263279 7490712 18103455 11433227 123093770 123099005 123449880 107904533 107924701 106418758 106367099 5728223 8085722 102582361 102624880 100841775 107815549 107817411
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