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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107925310   transcription factor bHLH30 
 ghi-r.1   107955646   agamous-like MADS-box protein AGL8 homolog 
 ghi-r.1   121217741   putative transcription factor bHLH107 
 ghi-r.1   121208567   transcription factor bHLH30 
 cit-r.1   102615360   transcription factor bHLH30 
 cit-r.1   102610740   transcription factor bHLH30 
 gma-u.5   100818879   transcription factor bHLH30-like 
 gma-u.5   100804756   transcription factor bHLH30 
 gma-u.5   100792902   transcription factor bHLH30 
 vvi-u.5   100256680   transcription factor bHLH106 
 vvi-u.5   100267703   transcription factor bHLH30 
 ppo-u.5   18104505   transcription factor bHLH30 
 ppo-u.5   7455910   transcription factor bHLH30 
 ppo-u.5   7470214   transcription factor bHLH106 
 mtr-u.5   11417767   transcription factor bHLH30 
 mtr-u.5   11425915   transcription factor bHLH106 
 mtr-u.5   11446990   putative transcription factor bHLH107 
 sly-u.5   101252043   transcription factor bHLH30-like 
 sly-u.5   101260837   transcription factor bHLH30 
 sot-r.1   102594182   transcription factor bHLH30-like 
 sot-r.1   102595445   transcription factor bHLH30-like 
 nta-r.1   107812515   transcription factor bHLH30-like 
 nta-r.1   107811315   transcription factor bHLH30 
 nta-r.1   107810276   transcription factor bHLH30-like 
 osa-u.5   4324583   transcription factor bHLH30 
 zma-u.5   118476620   transcription factor bHLH106 
 tae-r.2   123077726   transcription factor bHLH30 
 tae-r.2   123069204   transcription factor bHLH30 
 tae-r.2   123060686   transcription factor bHLH30 
 hvu-r.1   123443131   transcription factor bHLH30-like 
 sbi-r.1   8079506   transcription factor bHLH30 
 bdi-r.1   100828072   transcription factor bHLH30 

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Top 50 coexpressed genes to 107925310 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107925310 (ghi-r.1 coexpression data)

CoexMap"107925310"


ghiLOC107925310 | Entrez gene ID : 107925310    
Species ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi bra bna cre ath
Paralog 4 2 3 2 3 3 2 2 3 1 1 3 1 1 1 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO MF
GO:0046983 [list] [network] protein dimerization activity  (1206 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
Protein XP_016711462.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  extr 3,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_016711462.2)
Subcellular
localization
TargetP
other 4,  scret 3  (predict for XP_016711462.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107925310
ghi-r.1
for
107955646
ghi-r.1
for
121217741
ghi-r.1
for
121208567
cit-r.1
for
102615360
cit-r.1
for
102610740
gma-u.5
for
100818879
gma-u.5
for
100804756
gma-u.5
for
100792902
vvi-u.5
for
100256680
vvi-u.5
for
100267703
ppo-u.5
for
18104505
ppo-u.5
for
7455910
ppo-u.5
for
7470214
mtr-u.5
for
11417767
mtr-u.5
for
11425915
mtr-u.5
for
11446990
sly-u.5
for
101252043
sly-u.5
for
101260837
sot-r.1
for
102594182
sot-r.1
for
102595445
nta-r.1
for
107812515
nta-r.1
for
107811315
nta-r.1
for
107810276
osa-u.5
for
4324583
zma-u.5
for
118476620
tae-r.2
for
123077726
tae-r.2
for
123069204
tae-r.2
for
123060686
hvu-r.1
for
123443131
sbi-r.1
for
8079506
bdi-r.1
for
100828072


Ortholog ID: 4840
Species ghi ghi ghi cit cit gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot sot nta nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107925310 LOC107905376 LOC107938674 LOC102615360 LOC102610740 LOC100792902 LOC100784966 LOC100256680 LOC100267703 LOC18104505 LOC7455910 LOC7470214 LOC11417767 LOC11425915 LOC25487775 LOC101252043 LOC101260837 LOC102594182 LOC102595445 LOC107812515 LOC107810276 LOC107771768 LOC4324583 LOC118476620 LOC123077726 LOC123069204 LOC123060686 LOC123443131 LOC8079506 LOC100828072
Function* transcription factor bHLH30 putative transcription factor bHLH107 transcription factor AIG1 transcription factor bHLH30 transcription factor bHLH30 transcription factor bHLH30 transcription factor bHLH30 transcription factor bHLH106 transcription factor bHLH30 transcription factor bHLH30 transcription factor bHLH30 transcription factor bHLH106 transcription factor bHLH30 transcription factor bHLH106 transcription factor bHLH30 transcription factor bHLH30-like transcription factor bHLH30 transcription factor bHLH30-like transcription factor bHLH30-like transcription factor bHLH30-like transcription factor bHLH30-like transcription factor bHLH30-like transcription factor bHLH30 transcription factor bHLH106 transcription factor bHLH30 transcription factor bHLH30 transcription factor bHLH30 transcription factor bHLH30-like transcription factor bHLH30 transcription factor bHLH30
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 3
cit04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00053 Ascorbate and aldarate metabolism 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma01240 Biosynthesis of cofactors 2
gma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 5
vvi04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00592 alpha-Linolenic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
osa02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04820 Cytoskeleton in muscle cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04820 Cytoskeleton in muscle cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04820 Cytoskeleton in muscle cells 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107925310 107905376 107938674 102615360 102610740 100792902 100784966 100256680 100267703 18104505 7455910 7470214 11417767 11425915 25487775 101252043 101260837 102594182 102595445 107812515 107810276 107771768 4324583 118476620 123077726 123069204 123060686 123443131 8079506 100828072
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