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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107925338   50S ribosomal protein L17 
 ath-u.5   AT5G09770   Ribosomal protein L17 family protein 
 ath-u.5   AT5G64650   Ribosomal protein L17 family protein 
 gma-u.5   100305861   putative 50S ribosomal protein L17 
 gma-u.5   100785280   50S ribosomal protein L17 
 vvi-u.5   100252405   uncharacterized LOC100252405 
 ppo-u.5   7479131   uncharacterized LOC7479131 
 ppo-u.5   7486097   uncharacterized LOC7486097 
 mtr-u.5   11417035   50S ribosomal protein L17 
 mtr-u.5   11430437   50S ribosomal protein L17 
 sly-u.5   101252799   uncharacterized LOC101252799 
 osa-u.5   4339018   uncharacterized LOC4339018 
 osa-u.5   4327382   uncharacterized LOC4327382 
 zma-u.5   100284384   50S ribosomal protein L17-like 

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Top 50 coexpressed genes to 107925338 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107925338 (ghi-r.1 coexpression data)

CoexMap"107925338"


ghiLOC107925338 | Entrez gene ID : 107925338    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 2 2 1 2 2 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0015934 [list] [network] large ribosomal subunit  (540 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_016711481.1 [sequence] [blastp]
XP_040968810.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 4,  nucl 2  (predict for XP_016711481.1)
chlo 4,  mito 4,  nucl 2  (predict for XP_040968810.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_016711481.1)
mito 9  (predict for XP_040968810.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107925338
ath-u.5
for
AT5G09770
ath-u.5
for
AT5G64650
gma-u.5
for
100305861
gma-u.5
for
100785280
vvi-u.5
for
100252405
ppo-u.5
for
7479131
ppo-u.5
for
7486097
mtr-u.5
for
11417035
mtr-u.5
for
11430437
sly-u.5
for
101252799
osa-u.5
for
4339018
osa-u.5
for
4327382
zma-u.5
for
100284384


Ortholog ID: 5370
Species ghi ghi ath ath bra bra cit gma gma vvi ppo ppo mtr mtr sly sot nta nta osa osa zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC107920921 LOC107925338 AT5G09770 AT5G64650 LOC103837539 LOC103855831 LOC102609890 LOC100785280 LOC100305861 LOC100252405 LOC7479131 LOC7486097 LOC11430437 LOC11417035 LOC101252799 LOC102584866 LOC107802788 LOC107819732 LOC4339018 LOC4327382 LOC100284384 LOC123062532 LOC123079690 LOC123445392 LOC123444940 LOC8077687 LOC8085447 LOC100841328 LOC100839075 CHLRE_03g181350v5
Function* 50S ribosomal protein L17 50S ribosomal protein L17 Ribosomal protein L17 family protein Ribosomal protein L17 family protein 50S ribosomal protein L17 50S ribosomal protein L17 uncharacterized LOC102609890 50S ribosomal protein L17 putative 50S ribosomal protein L17 uncharacterized LOC100252405 uncharacterized LOC7479131 uncharacterized LOC7486097 50S ribosomal protein L17 50S ribosomal protein L17 uncharacterized LOC101252799 50S ribosomal protein L17-like uncharacterized LOC107802788 uncharacterized LOC107819732 uncharacterized LOC4339018 uncharacterized LOC4327382 50S ribosomal protein L17-like 50S ribosomal protein L17 50S ribosomal protein L17 50S ribosomal protein L17-like 50S ribosomal protein L17-like 50S ribosomal protein L17 50S ribosomal protein L17 50S ribosomal protein L17 50S ribosomal protein L17 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
ghi03015 mRNA surveillance pathway 2
ghi04136 Autophagy - other 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
ghi03015 mRNA surveillance pathway 2
ghi04136 Autophagy - other 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
cit03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
vvi03008 Ribosome biogenesis in eukaryotes 3
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 8
nta03010 Ribosome 4
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03010 Ribosome 4
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
sbi04120 Ubiquitin mediated proteolysis 4
sbi04141 Protein processing in endoplasmic reticulum 3
sbi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 6
cre03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107920921 107925338 830837 836586 103837539 103855831 102609890 100785280 100305861 100252405 7479131 7486097 11430437 11417035 101252799 102584866 107802788 107819732 4339018 4327382 100284384 123062532 123079690 123445392 123444940 8077687 8085447 100841328 100839075 5728482
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