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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107925422   RHOMBOID-like protein 10, chloroplastic 
 ghi-r.1   107925474   RHOMBOID-like protein 10, chloroplastic 
 ghi-r.1   121217682   RHOMBOID-like protein 10, chloroplastic 
 ghi-r.1   107921034   RHOMBOID-like protein 10, chloroplastic 
 ath-u.5   RBL10   RHOMBOID-like protein 10 
 bra-r.6   103835446   RHOMBOID-like protein 10, chloroplastic 
 bna-r.1   111199806   RHOMBOID-like protein 10, chloroplastic 
 bna-r.1   106359265   RHOMBOID-like protein 10, chloroplastic 
 cit-r.1   102626271   RHOMBOID-like protein 10, chloroplastic 
 gma-u.5   100805315   rhomboid-like protease 2-like 
 vvi-u.5   100242951   RHOMBOID-like protein 10, chloroplastic 
 ppo-u.5   7480772   RHOMBOID-like protein 10, chloroplastic 
 mtr-u.5   11413419   RHOMBOID-like protein 10, chloroplastic 
 sly-u.5   101261862   RHOMBOID-like protein 10, chloroplastic 
 sot-r.1   102582403   RHOMBOID-like protein 10, chloroplastic 
 nta-r.1   107780408   RHOMBOID-like protein 10, chloroplastic 
 nta-r.1   107769941   RHOMBOID-like protein 10, chloroplastic 
 osa-u.5   4347244   RHOMBOID-like protein 10, chloroplastic 
 zma-u.5   100191736   uncharacterized LOC100191736 
 tae-r.2   123112178   RHOMBOID-like protein 10, chloroplastic 
 tae-r.2   123103952   RHOMBOID-like protein 10, chloroplastic 
 tae-r.2   123121719   RHOMBOID-like protein 10, chloroplastic 
 hvu-r.1   123398590   RHOMBOID-like protein 10, chloroplastic 
 sbi-r.1   8062815   RHOMBOID-like protein 10, chloroplastic 
 bdi-r.1   100843508   RHOMBOID-like protein 10, chloroplastic 
 cre-r.1   CHLRE_16g690900v5   uncharacterized protein 

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Top 50 coexpressed genes to 107925422 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107925422 (ghi-r.1 coexpression data)

CoexMap"107925422"


ghiLOC107925422 | Entrez gene ID : 107925422    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0031969 [list] [network] chloroplast membrane  (173 genes)  IEA  
GO MF
GO:0004252 [list] [network] serine-type endopeptidase activity  (287 genes)  IEA  
Protein XP_016711572.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  plas 4,  E.R. 1,  pero 1  (predict for XP_016711572.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_016711572.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107925422
ghi-r.1
for
107925474
ghi-r.1
for
121217682
ghi-r.1
for
107921034
ath-u.5
for
RBL10
bra-r.6
for
103835446
bna-r.1
for
111199806
bna-r.1
for
106359265
cit-r.1
for
102626271
gma-u.5
for
100805315
vvi-u.5
for
100242951
ppo-u.5
for
7480772
mtr-u.5
for
11413419
sly-u.5
for
101261862
sot-r.1
for
102582403
nta-r.1
for
107780408
nta-r.1
for
107769941
osa-u.5
for
4347244
zma-u.5
for
100191736
tae-r.2
for
123112178
tae-r.2
for
123103952
tae-r.2
for
123121719
hvu-r.1
for
123398590
sbi-r.1
for
8062815
bdi-r.1
for
100843508
cre-r.1
for
CHLRE_16g690900v5


Ortholog ID: 7817
Species ghi ghi ghi ath bra bna bna cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107921034 LOC107921529 LOC107925392 RBL10 LOC103835446 LOC111199806 LOC106359265 LOC102626271 LOC100805315 LOC100242951 LOC7480772 LOC11413419 LOC101261862 LOC102582403 LOC107780408 LOC107769941 LOC4347244 LOC100191736 LOC123112178 LOC123103952 LOC123121719 LOC123398590 LOC8062815 LOC100843508 CHLRE_16g690900v5
Function* RHOMBOID-like protein 10, chloroplastic RHOMBOID-like protein 10, chloroplastic RHOMBOID-like protein 10, chloroplastic RHOMBOID-like protein 10 RHOMBOID-like protein 10, chloroplastic RHOMBOID-like protein 10, chloroplastic RHOMBOID-like protein 10, chloroplastic RHOMBOID-like protein 10, chloroplastic rhomboid-like protease 2-like RHOMBOID-like protein 10, chloroplastic RHOMBOID-like protein 10, chloroplastic RHOMBOID-like protein 10, chloroplastic RHOMBOID-like protein 10, chloroplastic RHOMBOID-like protein 10, chloroplastic RHOMBOID-like protein 10, chloroplastic RHOMBOID-like protein 10, chloroplastic RHOMBOID-like protein 10, chloroplastic uncharacterized LOC100191736 RHOMBOID-like protein 10, chloroplastic RHOMBOID-like protein 10, chloroplastic RHOMBOID-like protein 10, chloroplastic RHOMBOID-like protein 10, chloroplastic RHOMBOID-like protein 10, chloroplastic RHOMBOID-like protein 10, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
gma03040 Spliceosome 2
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 4
sot03040 Spliceosome 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00760 Nicotinate and nicotinamide metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 3
cre03250 Viral life cycle - HIV-1 2
cre03272 Virion - Hepatitis viruses 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107921034 107921529 107925392 839113 103835446 111199806 106359265 102626271 100805315 100242951 7480772 11413419 101261862 102582403 107780408 107769941 4347244 100191736 123112178 123103952 123121719 123398590 8062815 100843508 5724888
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