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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1  107925459  uncharacterized LOC107925459 
 ghi-r.1  107922250  uncharacterized LOC107922250 
 ghi-r.1  107921514  uncharacterized LOC107921514 
 ghi-r.1  107900976  uncharacterized LOC107900976 
 ath-u.5  AT4G08510  mediator of RNA polymerase II transcription subunit-like protein 
 ath-u.5  AT1G36990  C-jun-amino-terminal kinase-interacting protein 
 bra-r.6  103858482  uncharacterized LOC103858482 
 bra-r.6  117133009  uncharacterized LOC117133009 
 bna-r.1  111214086  uncharacterized LOC111214086 
 bna-r.1  125583632  uncharacterized LOC125583632 
 cit-r.1  102609086  uncharacterized LOC102609086 
 gma-u.5  100799079  mediator of RNA polymerase II transcription subunit 1 
 gma-u.5  100812026  mediator of RNA polymerase II transcription subunit 1 
 gma-u.5  100800475  mediator of RNA polymerase II transcription subunit 1 
 vvi-u.5  100262519  uncharacterized LOC100262519 
 vvi-u.5  100241871  uncharacterized LOC100241871 
 ppo-u.5  7463182  uncharacterized LOC7463182 
 ppo-u.5  7460929  uncharacterized LOC7460929 
 mtr-u.5  11411397  mediator of RNA polymerase II transcription subunit 1 
 mtr-u.5  25488392  stomatal closure-related actin-binding protein 3 
 mtr-u.5  11436047  mediator of RNA polymerase II transcription subunit 1 
 sly-u.5  101263472  uncharacterized LOC101263472 
 sly-u.5  101262360  uncharacterized LOC101262360 
 sly-u.5  101259017  uncharacterized LOC101259017 
 sot-r.1  102599717  splicing factor, arginine/serine-rich 19 
 sot-r.1  102594226  uncharacterized LOC102594226 
 nta-r.1  107795023  uncharacterized LOC107795023 
 nta-r.1  107807188  uncharacterized LOC107807188 
 nta-r.1  107817625  uncharacterized LOC107817625 

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Top 50 coexpressed genes to 107925459 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107925459 (ghi-r.1 coexpression data)

CoexMap"107925459"


ghiLOC107925459 | Entrez gene ID : 107925459
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta cre hvu tae bdi osa zma sbi
Paralog 4 2 2 2 1 3 2 2 3 3 2 3 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016711644.2 [sequence] [blastp]
XP_016711645.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_016711644.2)
nucl 10  (predict for XP_016711645.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016711644.2)
chlo 9  (predict for XP_016711645.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ghi-r.1
for
107925459


ghi-r.1
for
107922250


ghi-r.1
for
107921514


ghi-r.1
for
107900976


ath-u.5
for
AT4G08510


ath-u.5
for
AT1G36990


bra-r.6
for
103858482


bra-r.6
for
117133009


bna-r.1
for
111214086


bna-r.1
for
125583632


cit-r.1
for
102609086


gma-u.5
for
100799079


gma-u.5
for
100812026


gma-u.5
for
100800475


vvi-u.5
for
100262519


vvi-u.5
for
100241871


ppo-u.5
for
7463182


ppo-u.5
for
7460929


mtr-u.5
for
11411397


mtr-u.5
for
25488392


mtr-u.5
for
11436047


sly-u.5
for
101263472


sly-u.5
for
101262360


sly-u.5
for
101259017


sot-r.1
for
102599717


sot-r.1
for
102594226


nta-r.1
for
107795023


nta-r.1
for
107807188


nta-r.1
for
107817625



Ortholog ID: 3709
Species ghi ghi ghi ath ath bra bna bna cit gma gma gma vvi vvi ppo ppo mtr mtr mtr sly sly sly sot sot nta nta nta
Symbol LOC107922250 LOC107900976 LOC107900984 AT4G08510 AT1G36990 LOC103858482 LOC111214086 LOC125583632 LOC102609086 LOC100799079 LOC100800475 LOC100791100 LOC100262519 LOC100241871 LOC7463182 LOC7460929 LOC11411397 LOC25488392 LOC11436047 LOC101263472 LOC101262360 LOC101259017 LOC102599717 LOC102594226 LOC107795023 LOC107817625 LOC107821995
Function* uncharacterized LOC107922250 uncharacterized LOC107900976 uncharacterized LOC107900984 mediator of RNA polymerase II transcription subunit-like protein C-jun-amino-terminal kinase-interacting protein uncharacterized LOC103858482 uncharacterized LOC111214086 uncharacterized LOC125583632 uncharacterized LOC102609086 mediator of RNA polymerase II transcription subunit 1 mediator of RNA polymerase II transcription subunit 1 uncharacterized LOC100791100 uncharacterized LOC100262519 uncharacterized LOC100241871 uncharacterized LOC7463182 uncharacterized LOC7460929 mediator of RNA polymerase II transcription subunit 1 stomatal closure-related actin-binding protein 3 mediator of RNA polymerase II transcription subunit 1 uncharacterized LOC101263472 uncharacterized LOC101262360 uncharacterized LOC101259017 splicing factor, arginine/serine-rich 19 uncharacterized LOC102594226 uncharacterized LOC107795023 uncharacterized LOC107817625 uncharacterized LOC107821995
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 3
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107922250 107900976 107900984 826410 840609 103858482 111214086 125583632 102609086 100799079 100800475 100791100 100262519 100241871 7463182 7460929 11411397 25488392 11436047 101263472 101262360 101259017 102599717 102594226 107795023 107817625 107821995
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