ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107926883	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial
ghi-r.1	121202921	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial
ghi-r.1	107913757	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial
ghi-r.1	107918199	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial
ath-u.5	LEA3	Late embryogenesis abundant 3 (LEA3) family protein
ath-u.5	DI21	drought-induced 21
ath-u.5	SAG21	senescence-associated gene 21
bra-r.6	103844559	late embryogenis abundant protein 2
bra-r.6	103836752	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial
bra-r.6	103870223	late embryogenis abundant protein 41
bna-r.1	106379593	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial
bna-r.1	106444013	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial
bna-r.1	106395146	late embryogenis abundant protein 41
cit-r.1	102610790	indole-3-acetic acid-induced protein ARG2-like
cit-r.1	LEA5	late embryogenesis abundant protein Lea5-like
gma-u.5	100500411	putative late embryogenesis abundant 3 family protein
gma-u.5	100527032	indole-3-acetic acid-induced protein ARG2-like
gma-u.5	100776073	late embryogenesis abundant protein Lea5
vvi-u.5	100260685	indole-3-acetic acid-induced protein ARG2
ppo-u.5	7496687	late embryogenesis abundant protein Lea5
ppo-u.5	7487790	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial
ppo-u.5	7491294	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial
mtr-u.5	11412694	late embryogenesis abundant protein Lea5
mtr-u.5	11417464	indole-3-acetic acid-induced protein ARG2
sly-u.5	544187	indole-3-acetic acid-induced protein ARG2
sly-u.5	101259340	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial
sot-r.1	102577657	uncharacterized LOC102577657
sot-r.1	102586408	late embryogenesis abundant protein Lea5-like
nta-r.1	107764661	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial
nta-r.1	107828667	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial
osa-u.5	4327292	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial
osa-u.5	4338544	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial
zma-u.5	100280899	uncharacterized LOC100280899
zma-u.5	103650118	late embryogenesis abundant protein Lea5-D-like
tae-r.2	123075105	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial
tae-r.2	123058898	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial
tae-r.2	123066052	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial
hvu-r.1	123440603	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like
sbi-r.1	8079633	late embryogenis abundant protein 2
sbi-r.1	8060357	late embryogenesis abundant protein Lea5-D
bdi-r.1	100838172	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial

Top 50 coexpressed genes to 107926883 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107926883 (ghi-r.1 coexpression data)

CoexMap"107926883"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006950 [list] [network] response to stress

(2714 genes)

IEA

GO CC

GO:0005739 [list] [network] mitochondrion

(1525 genes)

IEA

GO MF

Protein

XP_016713309.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, cyto 1, mito 1

(predict for XP_016713309.1)

Subcellular
localization
TargetP

mito 3, scret 3

(predict for XP_016713309.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107926883	ghi-r.1 for 121202921	ghi-r.1 for 107913757	ghi-r.1 for 107918199	ath-u.5 for LEA3	ath-u.5 for DI21	ath-u.5 for SAG21	bra-r.6 for 103844559	bra-r.6 for 103836752	bra-r.6 for 103870223	bna-r.1 for 106379593	bna-r.1 for 106444013	bna-r.1 for 106395146	cit-r.1 for 102610790	cit-r.1 for LEA5	gma-u.5 for 100500411	gma-u.5 for 100527032	gma-u.5 for 100776073	vvi-u.5 for 100260685	ppo-u.5 for 7496687	ppo-u.5 for 7487790	ppo-u.5 for 7491294	mtr-u.5 for 11412694	mtr-u.5 for 11417464	sly-u.5 for 544187	sly-u.5 for 101259340	sot-r.1 for 102577657	sot-r.1 for 102586408	nta-r.1 for 107764661	nta-r.1 for 107828667	osa-u.5 for 4327292	osa-u.5 for 4338544	zma-u.5 for 100280899	zma-u.5 for 103650118	tae-r.2 for 123075105	tae-r.2 for 123058898	tae-r.2 for 123066052	hvu-r.1 for 123440603	sbi-r.1 for 8079633	sbi-r.1 for 8060357	bdi-r.1 for 100838172

Ortholog

Ortholog ID: 1511

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

LOC107926883

LOC107913757

LOC107926816

LEA3

DI21

SAG21

LEA5

LEA5

Function^*

protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial

Late embryogenesis abundant 3 (LEA3) family protein

drought-induced 21

senescence-associated gene 21

late embryogenis abundant protein 41

protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial

protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like

late embryogenis abundant protein 41

protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial

indole-3-acetic acid-induced protein ARG2-like

late embryogenesis abundant protein Lea5-like

late embryogenesis abundant protein Lea5

desiccation protective protein LEA5

indole-3-acetic acid-induced protein ARG2

late embryogenesis abundant protein Lea5

protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial

indole-3-acetic acid-induced protein ARG2

protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial

uncharacterized LOC102577657

late embryogenesis abundant protein Lea5-like

protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial

protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like

protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial

uncharacterized LOC100280899

late embryogenesis abundant protein Lea5-D-like

protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial

protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like

late embryogenis abundant protein 2

late embryogenesis abundant protein Lea5-D

protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00564	Glycerophospholipid metabolism	2
ghi00565	Ether lipid metabolism	2
ghi04144	Endocytosis	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00750	Vitamin B6 metabolism	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00750	Vitamin B6 metabolism	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00900	Terpenoid backbone biosynthesis	2
ath04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	5
ath03040	Spliceosome	2
ath00230	Purine metabolism	2
ath00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00910	Nitrogen metabolism	3
ath01310	Nitrogen cycle	3
ath01200	Carbon metabolism	2
ath01240	Biosynthesis of cofactors	2
ath00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00330	Arginine and proline metabolism	2
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00480	Glutathione metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	3
cit03083	Polycomb repressive complex	2
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	13
gma00260	Glycine, serine and threonine metabolism	2
gma00261	Monobactam biosynthesis	2
gma00270	Cysteine and methionine metabolism	2
gma00300	Lysine biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00940	Phenylpropanoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	3
ppo04141	Protein processing in endoplasmic reticulum	3
ppo03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00910	Nitrogen metabolism	5
mtr00250	Alanine, aspartate and glutamate metabolism	3
mtr01230	Biosynthesis of amino acids	3
mtr00220	Arginine biosynthesis	2
mtr00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	2
mtr04075	Plant hormone signal transduction	2
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	5
sly04141	Protein processing in endoplasmic reticulum	5
sly03083	Polycomb repressive complex	3
sly03013	Nucleocytoplasmic transport	2
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	4
sly04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	3
sot04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	3
sot04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	6
nta04075	Plant hormone signal transduction	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	2
nta00760	Nicotinate and nicotinamide metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04626	Plant-pathogen interaction	4
nta00062	Fatty acid elongation	2
nta04130	SNARE interactions in vesicular transport	2
nta04016	MAPK signaling pathway - plant	2
nta04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00790	Folate biosynthesis	2
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	3
hvu00670	One carbon pool by folate	2
hvu00270	Cysteine and methionine metabolism	2
hvu01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00030	Pentose phosphate pathway	3
sbi01200	Carbon metabolism	3
sbi00910	Nitrogen metabolism	3
sbi01230	Biosynthesis of amino acids	3
sbi00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	2
bdi00460	Cyanoamino acid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

107926883

107913757

107926816

839304

827273

828053

103870223

103858767

103868217

106395146

106435603

106438672

102610790

102610022

100776073

100813360

547885

100260685

7496687

7487790

7491294

11417464

25499593

544187

101259340

102577657

102586408

107764661

107795717

142179345

4327292

4338544

100280899

103650118

123075105

123440603

8079633

8060357

100838172

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	2	3	1	3	2	2	2	2	2	2	3	1	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107926883 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107926883 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**