ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107927086	pyruvate kinase, cytosolic isozyme
ghi-r.1	107895032	pyruvate kinase, cytosolic isozyme
ghi-r.1	107908997	pyruvate kinase, cytosolic isozyme
ghi-r.1	107918419	pyruvate kinase, cytosolic isozyme
ath-u.5	AT5G08570	Pyruvate kinase family protein
ath-u.5	AT5G63680	Pyruvate kinase family protein
ath-u.5	AT5G56350	Pyruvate kinase family protein
bra-r.6	103855804	pyruvate kinase, cytosolic isozyme
bra-r.6	103856933	probable pyruvate kinase, cytosolic isozyme
bna-r.1	106437660	probable pyruvate kinase, cytosolic isozyme
bna-r.1	106387433	probable pyruvate kinase, cytosolic isozyme
bna-r.1	106384952	pyruvate kinase, cytosolic isozyme-like
cit-r.1	102578009	pyruvate kinase
cit-r.1	102609200	pyruvate kinase, cytosolic isozyme-like
cit-r.1	102627705	probable pyruvate kinase, cytosolic isozyme
gma-u.5	100037452	pyruvate kinase
gma-u.5	547791	pyruvate kinase
gma-u.5	PK3	pyruvate kinase
vvi-u.5	100267318	pyruvate kinase
vvi-u.5	100265797	pyruvate kinase, cytosolic isozyme
vvi-u.5	100255318	pyruvate kinase, cytosolic isozyme
ppo-u.5	7461341	pyruvate kinase, cytosolic isozyme
ppo-u.5	7468475	pyruvate kinase, cytosolic isozyme
mtr-u.5	11431881	pyruvate kinase, cytosolic isozyme
mtr-u.5	11440906	pyruvate kinase, cytosolic isozyme
mtr-u.5	11446186	pyruvate kinase, cytosolic isozyme
sly-u.5	101250010	pyruvate kinase, cytosolic isozyme
sly-u.5	101265671	pyruvate kinase, cytosolic isozyme
sot-r.1	102596468	pyruvate kinase, cytosolic isozyme
sot-r.1	PK	pyruvate kinase
nta-r.1	107760370	pyruvate kinase, cytosolic isozyme
nta-r.1	107797877	pyruvate kinase, cytosolic isozyme
nta-r.1	107807979	pyruvate kinase, cytosolic isozyme-like
osa-u.5	4324263	pyruvate kinase, cytosolic isozyme
osa-u.5	4337406	pyruvate kinase, cytosolic isozyme
zma-u.5	100283899	pyruvate kinase, cytosolic isozyme
zma-u.5	100283452	pyruvate kinase, cytosolic isozyme
zma-u.5	542177	PK protein
tae-r.2	123055209	pyruvate kinase, cytosolic isozyme
tae-r.2	123097599	pyruvate kinase, cytosolic isozyme
tae-r.2	123047406	pyruvate kinase, cytosolic isozyme
hvu-r.1	123428348	pyruvate kinase, cytosolic isozyme-like
hvu-r.1	123443521	pyruvate kinase, cytosolic isozyme
sbi-r.1	8085870	pyruvate kinase, cytosolic isozyme
sbi-r.1	8084566	pyruvate kinase, cytosolic isozyme
sbi-r.1	8054665	pyruvate kinase, cytosolic isozyme
bdi-r.1	100821914	pyruvate kinase, cytosolic isozyme
bdi-r.1	100823647	pyruvate kinase, cytosolic isozyme
cre-r.1	CHLRE_12g533550v5	uncharacterized protein

Top 50 coexpressed genes to 107927086 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107927086 (ghi-r.1 coexpression data)

CoexMap"107927086"

[Cytoscape]

Annotation

functional annotation

KEGG

ghi00010 [list] [network] Glycolysis / Gluconeogenesis (341 genes)

ghi00620 [list] [network] Pyruvate metabolism (290 genes)

ghi01200 [list] [network] Carbon metabolism (681 genes)

ghi01230 [list] [network] Biosynthesis of amino acids (568 genes)

GO BP

GO:0006096 [list] [network] glycolytic process

(143 genes)

IEA

GO CC

GO:0005737 [list] [network] cytoplasm

(13864 genes)

IEA

GO MF

GO:0004743 [list] [network] pyruvate kinase activity	(35 genes)	IEA
GO:0030955 [list] [network] potassium ion binding	(35 genes)	IEA
GO:0000287 [list] [network] magnesium ion binding	(292 genes)	IEA

Protein

XP_016713542.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 7, pero 1, cysk 1, E.R._vacu 1

(predict for XP_016713542.2)

Subcellular
localization
TargetP

other 8, chlo 3

(predict for XP_016713542.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107927086	ghi-r.1 for 107895032	ghi-r.1 for 107908997	ghi-r.1 for 107918419	ath-u.5 for AT5G08570	ath-u.5 for AT5G63680	ath-u.5 for AT5G56350	bra-r.6 for 103855804	bra-r.6 for 103856933	bna-r.1 for 106437660	bna-r.1 for 106387433	bna-r.1 for 106384952	cit-r.1 for 102578009	cit-r.1 for 102609200	cit-r.1 for 102627705	gma-u.5 for 100037452	gma-u.5 for 547791	gma-u.5 for PK3	vvi-u.5 for 100267318	vvi-u.5 for 100265797	vvi-u.5 for 100255318	ppo-u.5 for 7461341	ppo-u.5 for 7468475	mtr-u.5 for 11431881	mtr-u.5 for 11440906	mtr-u.5 for 11446186	sly-u.5 for 101250010	sly-u.5 for 101265671	sot-r.1 for 102596468	sot-r.1 for PK	nta-r.1 for 107760370	nta-r.1 for 107797877	nta-r.1 for 107807979	osa-u.5 for 4324263	osa-u.5 for 4337406	zma-u.5 for 100283899	zma-u.5 for 100283452	zma-u.5 for 542177	tae-r.2 for 123055209	tae-r.2 for 123097599	tae-r.2 for 123047406	hvu-r.1 for 123428348	hvu-r.1 for 123443521	sbi-r.1 for 8085870	sbi-r.1 for 8084566	sbi-r.1 for 8054665	bdi-r.1 for 100821914	bdi-r.1 for 100823647	cre-r.1 for CHLRE_12g533550v5

Ortholog

Ortholog ID: 879

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

PK3

Function^*

pyruvate kinase, cytosolic isozyme

Pyruvate kinase family protein

probable pyruvate kinase, cytosolic isozyme

pyruvate kinase, cytosolic isozyme

probable pyruvate kinase, cytosolic isozyme

pyruvate kinase, cytosolic isozyme-like

pyruvate kinase

pyruvate kinase, cytosolic isozyme-like

probable pyruvate kinase, cytosolic isozyme

pyruvate kinase

pyruvate kinase, cytosolic isozyme

pyruvate kinase

pyruvate kinase, cytosolic isozyme

PK protein

pyruvate kinase, cytosolic isozyme

pyruvate kinase, cytosolic isozyme-like

pyruvate kinase, cytosolic isozyme

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	6
ghi00620	Pyruvate metabolism	6
ghi01200	Carbon metabolism	6
ghi01230	Biosynthesis of amino acids	6
ghi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	6
ghi00620	Pyruvate metabolism	6
ghi01200	Carbon metabolism	6
ghi01230	Biosynthesis of amino acids	6
ghi03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	5
ghi00010	Glycolysis / Gluconeogenesis	4
ghi00620	Pyruvate metabolism	4
ghi01200	Carbon metabolism	4
ghi01230	Biosynthesis of amino acids	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	8
ath00010	Glycolysis / Gluconeogenesis	7
ath00500	Starch and sucrose metabolism	6
ath01230	Biosynthesis of amino acids	5
ath00710	Carbon fixation by Calvin cycle	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	10
bra01230	Biosynthesis of amino acids	10
bra00010	Glycolysis / Gluconeogenesis	9
bra00710	Carbon fixation by Calvin cycle	6
bra00500	Starch and sucrose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	13
bra01230	Biosynthesis of amino acids	10
bra00010	Glycolysis / Gluconeogenesis	9
bra00020	Citrate cycle (TCA cycle)	5
bra00710	Carbon fixation by Calvin cycle	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00010	Glycolysis / Gluconeogenesis	5
bna00620	Pyruvate metabolism	5
bna01200	Carbon metabolism	5
bna01230	Biosynthesis of amino acids	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00010	Glycolysis / Gluconeogenesis	4
bna00620	Pyruvate metabolism	4
bna01200	Carbon metabolism	4
bna01230	Biosynthesis of amino acids	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00010	Glycolysis / Gluconeogenesis	4
bna00620	Pyruvate metabolism	4
bna01200	Carbon metabolism	4
bna01230	Biosynthesis of amino acids	4
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	10
cit00010	Glycolysis / Gluconeogenesis	9
cit01230	Biosynthesis of amino acids	9
cit00710	Carbon fixation by Calvin cycle	7
cit00620	Pyruvate metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00010	Glycolysis / Gluconeogenesis	7
cit01200	Carbon metabolism	7
cit01230	Biosynthesis of amino acids	6
cit00620	Pyruvate metabolism	3
cit00030	Pentose phosphate pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	7
gma01230	Biosynthesis of amino acids	5
gma00620	Pyruvate metabolism	4
gma01200	Carbon metabolism	4
gma00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01200	Carbon metabolism	6
gma00010	Glycolysis / Gluconeogenesis	5
gma00620	Pyruvate metabolism	5
gma00020	Citrate cycle (TCA cycle)	4
gma00785	Lipoic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01200	Carbon metabolism	15
vvi01230	Biosynthesis of amino acids	12
vvi00010	Glycolysis / Gluconeogenesis	10
vvi00710	Carbon fixation by Calvin cycle	8
vvi01210	2-Oxocarboxylic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00620	Pyruvate metabolism	2
vvi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00010	Glycolysis / Gluconeogenesis	13
ppo01200	Carbon metabolism	10
ppo01230	Biosynthesis of amino acids	10
ppo00710	Carbon fixation by Calvin cycle	7
ppo00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03050	Proteasome	6
ppo00010	Glycolysis / Gluconeogenesis	6
ppo01200	Carbon metabolism	6
ppo01230	Biosynthesis of amino acids	6
ppo00710	Carbon fixation by Calvin cycle	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	6
mtr01230	Biosynthesis of amino acids	4
mtr00010	Glycolysis / Gluconeogenesis	3
mtr00620	Pyruvate metabolism	3
mtr00020	Citrate cycle (TCA cycle)	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	5
mtr00010	Glycolysis / Gluconeogenesis	3
mtr00620	Pyruvate metabolism	3
mtr01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00010	Glycolysis / Gluconeogenesis	4
mtr00620	Pyruvate metabolism	4
mtr01200	Carbon metabolism	2
mtr01230	Biosynthesis of amino acids	2
mtr00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03050	Proteasome	10
sly01200	Carbon metabolism	3
sly00010	Glycolysis / Gluconeogenesis	2
sly00620	Pyruvate metabolism	2
sly01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00500	Starch and sucrose metabolism	3
sly00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03050	Proteasome	10
sot00190	Oxidative phosphorylation	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03050	Proteasome	4
sot00010	Glycolysis / Gluconeogenesis	2
sot01200	Carbon metabolism	2
sot01230	Biosynthesis of amino acids	2
sot03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01200	Carbon metabolism	10
nta00010	Glycolysis / Gluconeogenesis	8
nta00620	Pyruvate metabolism	8
nta00020	Citrate cycle (TCA cycle)	6
nta01210	2-Oxocarboxylic acid metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	4
nta01200	Carbon metabolism	4
nta01230	Biosynthesis of amino acids	4
nta00620	Pyruvate metabolism	2
nta00030	Pentose phosphate pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	5
nta00620	Pyruvate metabolism	5
nta01200	Carbon metabolism	5
nta00020	Citrate cycle (TCA cycle)	4
nta00260	Glycine, serine and threonine metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01200	Carbon metabolism	12
osa01230	Biosynthesis of amino acids	10
osa00010	Glycolysis / Gluconeogenesis	9
osa00620	Pyruvate metabolism	5
osa00051	Fructose and mannose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00010	Glycolysis / Gluconeogenesis	15
osa01200	Carbon metabolism	13
osa01230	Biosynthesis of amino acids	13
osa00051	Fructose and mannose metabolism	6
osa00620	Pyruvate metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00010	Glycolysis / Gluconeogenesis	11
zma01200	Carbon metabolism	7
zma01230	Biosynthesis of amino acids	7
zma00620	Pyruvate metabolism	6
zma00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00010	Glycolysis / Gluconeogenesis	10
zma00620	Pyruvate metabolism	6
zma01200	Carbon metabolism	6
zma01230	Biosynthesis of amino acids	6
zma00030	Pentose phosphate pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01200	Carbon metabolism	9
zma00010	Glycolysis / Gluconeogenesis	7
zma01230	Biosynthesis of amino acids	6
zma00620	Pyruvate metabolism	5
zma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	17
tae01200	Carbon metabolism	17
tae01230	Biosynthesis of amino acids	17
tae00620	Pyruvate metabolism	10
tae00030	Pentose phosphate pathway	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	2
tae04070	Phosphatidylinositol signaling system	2
tae00010	Glycolysis / Gluconeogenesis	2
tae00620	Pyruvate metabolism	2
tae01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	17
tae01200	Carbon metabolism	17
tae01230	Biosynthesis of amino acids	17
tae00710	Carbon fixation by Calvin cycle	11
tae00030	Pentose phosphate pathway	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	10
hvu00020	Citrate cycle (TCA cycle)	7
hvu01210	2-Oxocarboxylic acid metabolism	5
hvu00010	Glycolysis / Gluconeogenesis	5
hvu01230	Biosynthesis of amino acids	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	12
hvu00020	Citrate cycle (TCA cycle)	9
hvu01210	2-Oxocarboxylic acid metabolism	7
hvu00010	Glycolysis / Gluconeogenesis	6
hvu01230	Biosynthesis of amino acids	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00010	Glycolysis / Gluconeogenesis	9
sbi01200	Carbon metabolism	8
sbi01230	Biosynthesis of amino acids	7
sbi00710	Carbon fixation by Calvin cycle	4
sbi00620	Pyruvate metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03083	Polycomb repressive complex	3
sbi04120	Ubiquitin mediated proteolysis	3
sbi04141	Protein processing in endoplasmic reticulum	3
sbi03010	Ribosome	3
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01200	Carbon metabolism	10
sbi00010	Glycolysis / Gluconeogenesis	9
sbi01230	Biosynthesis of amino acids	8
sbi00710	Carbon fixation by Calvin cycle	7
sbi00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00010	Glycolysis / Gluconeogenesis	9
bdi01200	Carbon metabolism	9
bdi01230	Biosynthesis of amino acids	9
bdi00620	Pyruvate metabolism	4
bdi00710	Carbon fixation by Calvin cycle	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	13
bdi01230	Biosynthesis of amino acids	12
bdi00010	Glycolysis / Gluconeogenesis	12
bdi00710	Carbon fixation by Calvin cycle	6
bdi00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00620	Pyruvate metabolism	7
cre01200	Carbon metabolism	7
cre00061	Fatty acid biosynthesis	5
cre01212	Fatty acid metabolism	5
cre00010	Glycolysis / Gluconeogenesis	4

Expression

Expression pattern

Entrez Gene ID^*

107927086

107954715

107894021

830758

103856933

103847171

106437660

106384952

106366266

102578009

102609200

102627705

100037452

547689

100267318

100265797

100255318

7497765

7483227

11440906

11446186

25495079

101250010

101265671

102596468

102601328

107797877

107818508

107778911

4324263

4337406

100283899

100283452

542177

123078179

123092259

123191042

123428348

123443521

8085870

8084566

8054665

100821914

100823647

5718533

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	2	3	3	3	3	2	3	2	2	3	2	3	3	2	3	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107927086 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107927086 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**