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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107927098   transcription initiation factor TFIID subunit 15b 
 ath-u.5   TAF15b   TBP-associated factor 15B 
 gma-u.5   100819953   transcription initiation factor TFIID subunit 15b 
 gma-u.5   100813547   transcription initiation factor TFIID subunit 15b 
 gma-u.5   100782124   transcription initiation factor TFIID subunit 15b 
 vvi-u.5   100261263   transcription initiation factor TFIID subunit 15b 
 ppo-u.5   18102067   transcription initiation factor TFIID subunit 15b 
 ppo-u.5   18095136   transcription initiation factor TFIID subunit 15b 
 mtr-u.5   11409261   transcription initiation factor TFIID subunit 15b 
 sly-u.5   101251999   transcription initiation factor TFIID subunit 15b 
 osa-u.5   4324412   transcription initiation factor TFIID subunit 15b 
 zma-u.5   103649720   transcription initiation factor TFIID subunit 15b 
 zma-u.5   103634842   transcription initiation factor TFIID subunit 15b 

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Top 50 coexpressed genes to 107927098 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107927098 (ghi-r.1 coexpression data)

CoexMap"107927098"


ghiLOC107927098 | Entrez gene ID : 107927098    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 3 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03015 [list] [network] mRNA surveillance pathway (365 genes)
ghi03040 [list] [network] Spliceosome (739 genes)
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
Protein XP_016713562.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 2,  pero 1  (predict for XP_016713562.2)
Subcellular
localization
TargetP
other 9,  mito 3  (predict for XP_016713562.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107927098
ath-u.5
for
TAF15b
gma-u.5
for
100819953
gma-u.5
for
100813547
gma-u.5
for
100782124
vvi-u.5
for
100261263
ppo-u.5
for
18102067
ppo-u.5
for
18095136
mtr-u.5
for
11409261
sly-u.5
for
101251999
osa-u.5
for
4324412
zma-u.5
for
103649720
zma-u.5
for
103634842


Ortholog ID: 4998
Species ghi ghi ath bra bra bna bna cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae hvu sbi bdi
Symbol LOC107958536 LOC107927097 TAF15b LOC103856687 LOC103851637 LOC106387469 LOC106420496 LOC102612913 LOC100782124 LOC100778472 LOC100261263 LOC18095136 LOC18102067 LOC11409261 LOC101251999 LOC102596777 LOC107775077 LOC107780234 LOC4324412 LOC103634842 LOC103649720 LOC123060329 LOC123068849 LOC123442858 LOC8075105 LOC100837382
Function* transcription initiation factor TFIID subunit 15b transcription initiation factor TFIID subunit 15b TBP-associated factor 15B transcription initiation factor TFIID subunit 15b transcription initiation factor TFIID subunit 15b transcription initiation factor TFIID subunit 15b transcription initiation factor TFIID subunit 15b-like transcription initiation factor TFIID subunit 15b transcription initiation factor TFIID subunit 15b transcription initiation factor TFIID subunit 15b transcription initiation factor TFIID subunit 15b transcription initiation factor TFIID subunit 15b transcription initiation factor TFIID subunit 15b transcription initiation factor TFIID subunit 15b transcription initiation factor TFIID subunit 15b transcription initiation factor TFIID subunit 15b transcription initiation factor TFIID subunit 15b transcription initiation factor TFIID subunit 15b transcription initiation factor TFIID subunit 15b transcription initiation factor TFIID subunit 15b transcription initiation factor TFIID subunit 15b transcription initiation factor TFIID subunit 15b transcription initiation factor TFIID subunit 15b transcription initiation factor TFIID subunit 15b transcription initiation factor TFIID subunit 15b transcription initiation factor TFIID subunit 15b
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 9
ghi03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 8
bna03015 mRNA surveillance pathway 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 8
bna03015 mRNA surveillance pathway 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 10
gma03015 mRNA surveillance pathway 8
gma03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 8
gma03015 mRNA surveillance pathway 6
gma03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03015 mRNA surveillance pathway 3
vvi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 8
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
sly03015 mRNA surveillance pathway 3
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 6
osa03015 mRNA surveillance pathway 4
osa03250 Viral life cycle - HIV-1 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 9
zma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 9
zma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 9
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 9
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 8
bdi03015 mRNA surveillance pathway 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107958536 107927097 835960 103856687 103851637 106387469 106420496 102612913 100782124 100778472 100261263 18095136 18102067 11409261 101251999 102596777 107775077 107780234 4324412 103634842 103649720 123060329 123068849 123442858 8075105 100837382
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